FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.279e-42
Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L IRI  DKA +T+TI D+GIGM++ + + NLGTIARSGTKEF   L      D ++IGQFGVGFYS ++VA+++ V T+      +E   WES   G FT+    + E   RGT +TL+L+E +
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLSGDQQKDAALIGQFGVGFYSGFIVADKITVETRRAGLPANEAVRWESAGEGDFTID---AIERAQRGTTITLHLREGE 183          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.279e-42
Identity = 92/184 (50.00%), Postives = 126/184 (68.48%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LDG  EL IR+  DKA +T+TI D+GIG+++ + V NLGTIARSGT+EF   L      D  +IGQFGVGFYS+++VA++V V ++      +E   WES   G F++      E  GRGT + L+L+ D+
Sbjct:   10 SETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQLTGDKQKDAQLIGQFGVGFYSSFIVADKVTVLSRRAGLAANEAIRWESDGQGEFSI---APAEKAGRGTDVVLHLRADE 190          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.279e-42
Identity = 92/184 (50.00%), Postives = 126/184 (68.48%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LDG  EL IR+  DKA +T+TI D+GIG+++ + V NLGTIARSGT+EF   L      D  +IGQFGVGFYS+++VA++V V ++      +E   WES   G F++      E  GRGT + L+L+ D+
Sbjct:   10 SETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQLTGDKQKDAQLIGQFGVGFYSSFIVADKVTVLSRRAGLAANEAIRWESDGQGEFSI---APAEKAGRGTDVVLHLRADE 190          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.670e-42
Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L IRI  DKA +T+TI D+GIGM++ + + NLGTIARSGTKEF   L      D ++IGQFGVGFYS ++VA+++ V T+      +E   WES   G FT+    + E   RGT +TL+L+E +
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLSGDQQKDAALIGQFGVGFYSGFIVADKITVETRRAGLPANEAVRWESAGEGDFTID---AIERAQRGTTITLHLREGE 183          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.670e-42
Identity = 89/187 (47.59%), Postives = 132/187 (70.59%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + + ET  FQ+E+ QLL+L+I++ YSNKEIFLRELISN+SDA DK+RF +L      +G  EL++RII +K  +T+TI+D+GIGM + ++++NLGTIA+SGTK F+E +      +  +IGQFGVGFYSA++VA++V+V T+    + DE   WES   G + +      E   RGT++TL+L+E +
Sbjct:    3 LKEQETLGFQSEVKQLLNLMIHSLYSNKEIFLRELISNASDAADKLRFLALAKPDLYEGNGELYVRIICNKEKRTITIIDNGIGMCRTEVIDNLGTIAKSGTKAFLETIDVKNSKNNQLIGQFGVGFYSAFIVAQKVIVRTRAAGASADEGVHWESTGEGDYIIAAINKPE---RGTEITLFLREGE 186          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.670e-42
Identity = 93/186 (50.00%), Postives = 126/186 (67.74%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR---FESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA---GADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            +ET  F+ ++NQ++  +I + YS+KE+FLREL+SNSSDA DK++   F+       LD    L I IIP+K N+TLTI D+GIGMTK DL+N +GTIA SGTK+F E ++     AD S +IGQFG+GFYS+YLVAERV + TKH  DE  +W S     +T+  +  GEP   GT + LY+KE +
Sbjct:   18 SETHGFEVDVNQMMDTMIKSVYSSKELFLRELVSNSSDACDKLKALYFQLREKGCVLDPVTSLGIEIIPNKDNRTLTIKDNGIGMTKPDLMNFIGTIASSGTKKFREEMKEKGNSADASNLIGQFGLGFYSSYLVAERVDLITKHPSDEALVWTSTGRDVYTI-EEYDGEPFAHGTSLVLYIKEGE 202          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 132/187 (70.59%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E +
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42
Identity = 92/187 (49.20%), Postives = 131/187 (70.05%), Query Frame = 1
Query:  115 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ S  +G  EL +R+  DK   T+TI D+GIGMT+  ++ +LGTIA+SGT EF + L   +  D  +IGQFGVGFYSA++VA+RV V T+   H+ DE   WES+  G+F+V      E   RGTK+ L+L++++
Sbjct:    1 MSHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKDKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLIGQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEGNFSVETITKAE---RGTKIVLHLRDEE 184          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_BURCA1.279e-4251.37Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BORPA1.279e-4250.00Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR1.279e-4250.00Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_BURCM1.670e-4251.37Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_BAUCH1.670e-4247.59Chaperone protein htpG OS=Baumannia cicadellinicol... [more]
HSP82_ENCCU1.670e-4250.00Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]
HTPG_SHISS2.181e-4249.20Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL2.181e-4249.20Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS2.181e-4249.20Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_SHEAM2.181e-4249.20Chaperone protein htpG OS=Shewanella amazonensis (... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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