FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.768e-76
Identity = 145/180 (80.56%), Postives = 161/180 (89.44%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+  +LKEDQ
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVIPHLKEDQ 194
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.309e-76
Identity = 142/180 (78.89%), Postives = 163/180 (90.56%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYL+A+RV VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPLGRGTKIVLYIKEDQ 182
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.016e-76
Identity = 142/180 (78.89%), Postives = 163/180 (90.56%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYL+A+RV VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPLGRGTKIXLYIKEDQ 182
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.016e-76
Identity = 143/180 (79.44%), Postives = 163/180 (90.56%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVA++V VT+K+NDDEQYIWES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRAD-NSEPLGRGTKIVLYIKEDQ 182
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.939e-76
Identity = 142/180 (78.89%), Postives = 163/180 (90.56%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVA++V VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRAD-NSEPLGRGTKIVLYIKEDQ 182
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.939e-76
Identity = 142/180 (78.89%), Postives = 163/180 (90.56%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL+I++IP+K   TLTI+D+GIGMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVA++V VT+K+NDDEQY+WES AGGSFTV  D + EPLGRGTK+ LY+KEDQ
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRAD-NSEPLGRGTKIVLYIKEDQ 182
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 284.263 bits (726), Expect = 5.144e-76
Identity = 146/180 (81.11%), Postives = 160/180 (88.89%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189
[Close]
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.718e-76
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 1 
Query:  121 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQ 189
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90A_PANTR1.768e-7680.56Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HSP83_DROPS2.309e-7678.89Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROMI3.016e-7678.89Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HSP83_DROAV3.016e-7679.44Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROSI3.939e-7678.89Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROME3.939e-7678.89Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HS90B_BOVIN5.144e-7681.11Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90B_RAT6.718e-7680.56Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB6.718e-7680.56Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA6.718e-7680.56Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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