FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CHLPD (Chaperone protein htpG OS=Chlorobium phaeobacteroides (strain DSM 266) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.618e-37
Identity = 86/180 (47.78%), Postives = 122/180 (67.78%), Query Frame = 1
Query:  133 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL---QAGADVSMIGQFGVGFYSAYLVAERVVVTTKHN--DDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + ++AE+ QLL LI+++ Y++ EIFLRELISN+SDAL K+RF +LTD+S ++    L IRI  D    T+ I D+G GMT+ +L+ NLGT+ARSGT  F++AL   Q   D ++IGQFGVGFYS ++V + V V T+ +  D   Y W S A G+FT+ R    E   RGTK++  LK++
Sbjct:   12 YEYKAEMKQLLELIVHSLYTHPEIFLRELISNASDALSKVRFNALTDESIINSDAGLAIRITLDPEAHTIVIEDNGTGMTEEELILNLGTVARSGTLGFLQALKEQQKELDGNLIGQFGVGFYSVFMVTDEVTVETRSSGADSAGYRWRSGAAGTFTIERI---EKEQRGTKISFALKDE 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.618e-37
Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLKED 657
            F+AE  +LL ++IN+ YS KE+FLRELISN+SDA+DKI +++LTD S    + + +I+I  DK N+TLTI D+GIGMTK +L  +LGTIA+SG+  F +  +      +IGQFGVGFY+A++VA+ V V TK H  DE + WES     +T+      EP  +   GT + L LKE+
Sbjct:    6 FKAESKRLLDIMINSIYSQKEVFLRELISNASDAIDKIYYKALTDDSLTFNKDDYYIKISADKENRTLTIADTGIGMTKEELEEHLGTIAKSGSLAFKQENELKDGHDIIGQFGVGFYAAFMVADTVTVITKAHGSDEAHQWESAGADGYTI------EPAAKESAGTDVILKLKEN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.113e-37
Identity = 87/183 (47.54%), Postives = 123/183 (67.21%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD---EQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE+L      +G  +L IR+  DK   T+T+ D+GIGM++ D++ +LGTIA+SGT +FM+ L      D  +IGQFGVGFYSA++VA++V V ++       E   W S+  G F V    + +   RGT++ L+LK+D+
Sbjct:    8 ETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALAKPELFEGDADLKIRLSFDKDAGTVTLEDNGIGMSREDVIAHLGTIAKSGTADFMKNLTGDQKKDSHLIGQFGVGFYSAFIVADKVDVYSRRAGQPAAEGVHWSSKGEGEFEV---ATIDKPQRGTRIVLHLKKDE 187          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FUSNN (Chaperone protein htpG OS=Fusobacterium nucleatum subsp. nucleatum GN=htpG PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.113e-37
Identity = 83/175 (47.43%), Postives = 122/175 (69.71%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKE 654
            F+AE  +LL+L+I++ Y+NKEIFLRELISN++DA+DK++F+SLTD   L    +  I I  DK N+TLTI D+GIGMT  ++ +N+GTIA+SG+K F E L+     D+ +IGQFGVGFYS ++VA+++ + TK    E  + W S   G++ +      +   RGTK+TL+LK+
Sbjct:    8 FKAETKELLNLMIHSIYTNKEIFLRELISNANDAIDKLKFQSLTDTDILKDNDKFRIDISVDKDNRTLTISDNGIGMTYEEVDDNIGTIAKSGSKLFKEQLEEAKKGDIDIIGQFGVGFYSGFIVADKITLETKSPYSENGVKWISSGDGNYEIEEIAKQD---RGTKITLHLKD 179          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.759e-37
Identity = 83/180 (46.11%), Postives = 123/180 (68.33%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET+ F AE+ ++L L+I+T Y+NK+IFLRELISN+SDA DK+R+ S ++   L G+ +  I +  DK  + + + D+GIGM K DL  NLGTIA SGT++F+E L   A  D  +IGQFGVGFYS+Y+VA+ V V++ K  + + Y W S+  G + +  D   + + RGTK+TL++K +
Sbjct:    4 ETYKFDAEVGKVLHLVIHTLYTNKKIFLRELISNASDACDKLRYLSQSNAELLQGESDFKITVSMDKEKRYIILQDNGIGMNKEDLTQNLGTIASSGTQKFLEQLGNDAKKDNMLIGQFGVGFYSSYMVADEVKVISKKAGEAQAYQWSSKGEGEYYI-EDCEADFI-RGTKITLHIKPE 181          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 82/175 (46.86%), Postives = 120/175 (68.57%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGA--DVSMIGQFGVGFYSAYLVAERVVVTT-KHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKE 654
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++   + G     I +  DK N+ + I D+GIGM K DL+ NLGTIARSGT  F++ L   +  D  +IGQFGVGFYS+++VA++V VT+ K  +++ Y WES   G + V    S +   RGT++ LY+K+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFKIIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGENKVYTWESDGLGEYIVAD--SEQEFARGTEIVLYIKK 180          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 80/180 (44.44%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  133 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + F+ E+++LL L+I++ YSN+EIFLREL+SNSSDA++K+R+ES+++ +  +   +  IRI  DK  KT+T+ D+GIGMT+ +++ NLGTIA+SGTK+F+E+L      D  +IGQFGVGFYS+++VA++V V T+    +  +   W S A   FTV      +   RGT++ L++K++
Sbjct:    6 YTFETEVDKLLHLVIHSLYSNREIFLRELVSNSSDAIEKLRYESISNAALNEDDTDYAIRIDFDKDAKTITVSDNGIGMTEEEVIENLGTIAKSGTKKFLESLTGDKSKDNELIGQFGVGFYSSFIVADKVTVRTRKAGQDKSQATKWVSDAQNGFTVETITKEK---RGTEVILHIKKE 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 80/180 (44.44%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  133 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + F+ E+++LL L+I++ YSN+EIFLREL+SNSSDA++K+R+ES+++ +  +   +  IRI  DK  KT+T+ D+GIGMT+ +++ NLGTIA+SGTK+F+E+L      D  +IGQFGVGFYS+++VA++V V T+    +  +   W S A   FTV      +   RGT++ L++K++
Sbjct:    6 YTFETEVDKLLHLVIHSLYSNREIFLRELVSNSSDAIEKLRYESISNAALNEDDTDYAIRIDFDKDAKTITVSDNGIGMTEEEVIENLGTIAKSGTKKFLESLTGDKSKDNELIGQFGVGFYSSFIVADKVTVRTRKAGQDKSQATKWVSDAQNGFTVETITKEK---RGTEVILHIKKE 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 80/180 (44.44%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  133 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + F+ E+++LL L+I++ YSN+EIFLREL+SNSSDA++K+R+ES+++ +  +   +  IRI  DK  KT+T+ D+GIGMT+ +++ NLGTIA+SGTK+F+E+L      D  +IGQFGVGFYS+++VA++V V T+    +  +   W S A   FTV      +   RGT++ L++K++
Sbjct:    6 YTFETEVDKLLHLVIHSLYSNREIFLRELVSNSSDAIEKLRYESISNAALNEDDTDYAIRIDFDKDAKTITVSDNGIGMTEEEVIENLGTIAKSGTKKFLESLTGDKSKDNELIGQFGVGFYSSFIVADKVTVRTRKAGQDKSQATKWVSDAQNGFTVETITKEK---RGTEVILHIKKE 182          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 80/180 (44.44%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  133 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + F+ E+++LL L+I++ YSN+EIFLREL+SNSSDA++K+R+ES+++ +  +   +  IRI  DK  KT+T+ D+GIGMT+ +++ NLGTIA+SGTK+F+E+L      D  +IGQFGVGFYS+++VA++V V T+    +  +   W S A   FTV      +   RGT++ L++K++
Sbjct:    6 YTFETEVDKLLHLVIHSLYSNREIFLRELVSNSSDAIEKLRYESISNAALNEDDTDYAIRIDFDKDAKTITVSDNGIGMTEEEVIENLGTIAKSGTKKFLESLTGDKSKDNELIGQFGVGFYSSFIVADKVTVRTRKAGQDKSQATKWVSDAQNGFTVETITKEK---RGTEVILHIKKE 182          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_CHLPD1.618e-3747.78Chaperone protein htpG OS=Chlorobium phaeobacteroi... [more]
HTPG_BACLD1.618e-3748.02Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_PSEPK2.113e-3747.54Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_FUSNN2.113e-3747.43Chaperone protein htpG OS=Fusobacterium nucleatum ... [more]
HTPG_ORITB2.759e-3746.11Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
HTPG_RICTY3.604e-3746.86Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_FRATW3.604e-3744.44Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATT3.604e-3744.44Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATN3.604e-3744.44Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAT13.604e-3744.44Chaperone protein htpG OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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