FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB1 (Chaperone protein htpG OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.789e-36
Identity = 84/181 (46.41%), Postives = 121/181 (66.85%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLKED 657
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    +   +IR++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      EP  +   GT++ L +K++
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDNYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTI------EPCEKETYGTEIILKIKDN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 85/181 (46.96%), Postives = 120/181 (66.30%), Query Frame = 1
Query:  124 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADV----SMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK 651
            +ET  FQAE  QLL L++++ YSNK++FLRELISN+SDALDK+R  SL DK       +L I I  D   +TLT+ D+GIGM++ ++V  +GTIA+SGT E +  L+  AD      +IGQFGVGFY+A++VA+RVV+ T+     +   WES   G++T+    S     +GT +TL+LK
Sbjct:    3 SETLEFQAEARQLLQLMVHSIYSNKDVFLRELISNASDALDKLRLASLRDKDLDVDTADLHIAIEIDPDARTLTVRDNGIGMSRDEVVQVIGTIAKSGTAELLRTLRESADAETSQELIGQFGVGFYAAFMVADRVVLVTREAGATDGTRWESSGEGTYTI---ASATDAPQGTAVTLHLK 180          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_NATTJ (Chaperone protein htpG OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 86/181 (47.51%), Postives = 123/181 (67.96%), Query Frame = 1
Query:  130 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEA----LQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            T  FQAE  +LL ++IN+ YSNKEIFLRELISN+SDA+DK+ ++SLTD S    + + +I+I  DK N+ L I D+GIGMT+ +L +N+G IARSG+ +F +A    ++ G D+  IGQFGVGFYSA++VAE V + +K +  D  Y WES+    ++V+     E    GT + L +KE+
Sbjct:    3 TQEFQAETKRLLDIVINSIYSNKEIFLRELISNASDAIDKLYYKSLTDNSLDFNKDDYYIKITVDKENRQLKISDTGIGMTRQELEDNIGVIARSGSLDFKKANEQEIKDGHDI--IGQFGVGFYSAFMVAEEVTIISKAYGSDHAYKWESEGIEGYSVS---PTEKESVGTDVILKIKEN 178          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 86/185 (46.49%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  E   FQAE  QLL L+I++ YSNK+ FLRELISN+SDALDK+R E+  +K       +L I    DK  +TLT+ D+GIGMT+A++V+ +GT+A+SGT E      EA    A   +IGQFG+GFYS+++VA++V ++T K  + E   WES   G++T+   V G P  +GT +TL+LK +
Sbjct:    3 ARVEQLEFQAEARQLLDLMIHSVYSNKDSFLRELISNASDALDKLRIEAFRNKDLEVDTSDLHIETEADKGARTLTVRDNGIGMTRAEVVDLIGTLAKSGTAELRAQLREAKNDAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWESSGEGTYTI-ESVEGAP--QGTSVTLHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 85/185 (45.95%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK +
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 85/185 (45.95%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK +
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 85/185 (45.95%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK +
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36
Identity = 85/185 (45.95%), Postives = 122/185 (65.95%), Query Frame = 1
Query:  118 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK +
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.051e-36
Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQ-YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            F+AE  +LL +++N+ YS KEIFLRELISN+SDA+DKI + +L+D S    + + FI++  +K ++TLT+ D+GIGMTK +L +NLGTIA+SG+  F    ++     +IGQFGVGFYSA++VA++V VTTK   +E  Y WES     +T+   ++ E +  GT++ L LKE+
Sbjct:    6 FKAESKRLLEMMVNSIYSQKEIFLRELISNASDAIDKIYYRALSDDSITFNKDDYFIKVTANKEDRTLTVSDTGIGMTKEELESNLGTIAKSGSLAFKTENESKDGHDIIGQFGVGFYSAFMVADKVTVTTKALGEESGYQWESTGADGYTIL-PIAKESV--GTEIRLKLKEN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_ALISL (Chaperone protein htpG OS=Aliivibrio salmonicida (strain LFI1238) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.051e-36
Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++    +G  +L ++I  +    TLTI D+GIGM + D++ +LGTIA+SGT +F   L      D  +IGQFGVGFYSA++VA+ V V T+      D+   W S+  G +T+  DV+ E   RGT + L+++++
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKISFNVEANTLTISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWHSEGEGDYTI-EDVTKE--SRGTDIILHMRDE 188          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_CLOB11.789e-3646.41Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_SALTO2.336e-3646.96Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_NATTJ2.336e-3647.51Chaperone protein htpG OS=Natranaerobius thermophi... [more]
HTPG_MYCUA2.336e-3646.49Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_MYCTU2.336e-3645.95Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA2.336e-3645.95Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCBP2.336e-3645.95Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO2.336e-3645.95Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_BACHD3.051e-3647.13Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_ALISL3.051e-3646.15Chaperone protein htpG OS=Aliivibrio salmonicida (... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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