FC920358

Overview
NameFC920358
Unique NameFC920358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.085e-33
Identity = 83/177 (46.89%), Postives = 120/177 (67.80%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQ--YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            FQAE  +LL ++  + YS KE+F+RELISN+SDAL+K+R + +++   L   P++ I +  D    T+TI D+G+GM++ +LV+NLGTIARSG+K F++AL  QA A   +IGQFGVGFYSA++VA+RV V ++  D     Y W S   G F V  + SG  +  GTK+ ++LK D
Sbjct:   89 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSEGQAL---PDMEIHLQTDADRGTITIQDTGVGMSREELVSNLGTIARSGSKAFLDALQNQAEAGSKIIGQFGVGFYSAFMVADRVEVYSRSVDAGSLGYRWLSDGSGVFEVA-EASG--VRTGTKIIIHLKAD 259          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.851e-33
Identity = 80/182 (43.96%), Postives = 115/182 (63.19%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL---QAGADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            + F ++AE+ QLL LI+++ Y++ EIFLREL+SN+SDAL K RF +LTD +      E  IRI  D       I D+GIGMT+ +L+ NLGT+ARSGT  FM+AL   +   D ++IGQFGVGFYS ++V + V V T+      E   W S   G++T+ +    EP   GT+++  LK++
Sbjct:   10 QEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNASDALSKARFSALTDDTMAKVSGEAAIRISLDAKTAAFAIEDTGIGMTEEELIANLGTVARSGTLGFMQALRQEKKELDGNLIGQFGVGFYSVFMVTDDVTVETRSARAGSEGLRWRSSGQGTYTIEKIDKKEP---GTRISFTLKDE 188          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33
Identity = 83/182 (45.60%), Postives = 116/182 (63.74%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ----AGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            ET  FQAE  QLL L++++ YSNK+IFLRELISN+SDALDK+R  SL          +L I I  D   +TLT+ D+GIGM++ ++V  +GTIA+SGT E +  L+      A   +IGQFGVGFYS ++VA++V ++T K  +     WES   G++ V   V   P  RGT +T++LK +
Sbjct:    6 ETLEFQAEARQLLQLMVHSIYSNKDIFLRELISNASDALDKLRIASLVKDGPRVDSADLRIEIEADVNARTLTVRDNGIGMSRDEVVGLIGTIAKSGTAELLRKLRESEDGAASSDLIGQFGVGFYSTFMVADKVTLLTGKAGESGGTRWESDGAGTY-VIETVDDAP--RGTAVTVHLKPE 184          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQ 660
            ET  F+AE  +LL ++I++ Y++KEIFLRELISN+SDA+DKI +++LTD++    +    I I P+K  + L + D+GIGMTK +L  NLGTIA+SG+  F    ++     +IGQFGVGFYSA++VA+ V V TK    D  Y WES     +T+  +V  E +  GT +TL++K ++
Sbjct:    2 ETKQFKAESKRLLEMMIHSIYTHKEIFLRELISNASDAMDKIYYKALTDETITFDKDAYKITIEPNKETRQLILRDTGIGMTKDELEENLGTIAKSGSLAFKAENESKDGHDIIGQFGVGFYSAFMVADTVTVVTKPFGSDVAYKWESHGVDGYTI-EEVEKEMV--GTDITLHIKANE 177          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BORBU (Chaperone protein htpG OS=Borrelia burgdorferi GN=htpG PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHN-DDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            F  E+N LL LII++ YS+KEIFLRELISN+SDA+DK++F SLT++   +   E  I I  D  +K++ I D+GIGM + DL N+LG IA+SGTKEF+  L+       S+IGQFGVGFYSA++V+E+V VT+K   + + YIW S     + + +    E    GT++ LYL ++
Sbjct:    5 FDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLSLTNEKFKNIALEPKIEISFD--DKSILIKDNGIGMDEQDLTNHLGVIAKSGTKEFINNLKQDEKKSASLIGQFGVGFYSAFIVSEKVEVTSKKALESDAYIWSSDGKTGYEIEKAKKEE---SGTEIKLYLNKE 175          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BORAP (Chaperone protein htpG OS=Borrelia afzelii (strain PKo) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 81/176 (46.02%), Postives = 119/176 (67.61%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHN-DDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            F  E+N LL LII++ YS+KEIFLRELISN+SDA+DK++F SLT++   +   E  I I  D  +K++ I D+GIGM + +L N+LG IA+SGTKEF+  L+       ++IGQFGVGFYSA++V+E+V VT+K   + + YIW S     + + +    +P   GT++ LYL ++
Sbjct:    5 FDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLSLTNEKFKNIALEPKIEITFD--DKSILIKDNGIGMNEQELTNHLGVIAKSGTKEFINNLKQDEKKSANLIGQFGVGFYSAFIVSEKVEVTSKKALESDAYIWSSDGKTGYEIEKAKKEDP---GTEIKLYLNKE 175          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33
Identity = 80/177 (45.20%), Postives = 116/177 (65.54%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLKED 657
            F+AE  +LL ++IN+ Y+ KEIFLRELISNSSDA+DKI +++LTD +    +   +I++  DK  +TLTI D+GIGMTK +L  +LGTIA+SG+  F +  +      +IGQFGVGFY+A++VA+ V V +K    +E Y WES     +T+      EP  +   GT + L +KE+
Sbjct:    6 FKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTI------EPCEKDSVGTDIILKIKEN 176          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_BORGA (Chaperone protein htpG OS=Borrelia garinii GN=htpG PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.123e-33
Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 1
Query:  139 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHN-DDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            F  E+N LL LII++ YS+KEIFLRELISN+SDA+DK++F SLT++   +   E  I I  D  +K++ I D+GIGM + DL N+LG IA+SGTKEF+  L+       S+IGQFGVGFYSA++V+E+V VT+K   + + YIW S     + + +    E    GT++ LYL ++
Sbjct:    5 FDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLSLTNEKFKNIALEPKIEITFD--DKSILIKDNGIGMNEQDLTNHLGVIAKSGTKEFINNLKQDEKKSASLIGQFGVGFYSAFIVSEKVEVTSKKALESDAYIWFSDGKTGYEIEKAKKEE---SGTEIKLYLNKE 175          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.385e-33
Identity = 74/181 (40.88%), Postives = 117/181 (64.64%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL---QAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            E+  F+A++ +LL +++++ YS+K +FLRELISN +DA +K+R+E++   S L    E  I +  D+ ++ L + D+GIGM + +++  LGTIARSGT+ FME +   +A      IGQFGVGFYS ++VAE V V++ +   +E + W S   GS++V      E   RGT++ L+L ED
Sbjct:   10 ESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQLVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSDGKGSYSVEAANLVEAPARGTRIVLHLMED 190          
BLAST of FC920358 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.200e-32
Identity = 79/182 (43.41%), Postives = 118/182 (64.84%), Query Frame = 1
Query:  127 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGT----KEFMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKED 657
            E   FQAE  QLL L+I++ YSNK+ FLRELISN+SDALDK+R E+  +K       +L + I  D   +TLT+ D+GIGM+  ++V+ +GT+A+SGT    ++  EA  A A   +IGQFG+GFYS ++VA++V ++T K  + E   WES    ++T+   V   P  +G+ +TL+LK +
Sbjct:    6 EQLEFQAETRQLLDLMIHSVYSNKDSFLRELISNASDALDKLRLEAFRNKELHVDTSDLHVEIEVDAEKRTLTVRDNGIGMSHDEVVDLIGTLAKSGTADLRRKLKEAKDAAASEELIGQFGIGFYSTFMVADKVTLLTRKAGESEATRWESSGEATYTI-EAVDDAP--QGSSVTLHLKPE 184          
The following BLAST results are available for this feature:
BLAST of FC920358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
TRAP1_BOVIN1.085e-3346.89Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_PELLD1.851e-3343.96Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_FRASC2.417e-3345.60Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_EXIS23.157e-3345.25Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HTPG_BORBU3.157e-3347.16Chaperone protein htpG OS=Borrelia burgdorferi GN=... [more]
HTPG_BORAP3.157e-3346.02Chaperone protein htpG OS=Borrelia afzelii (strain... [more]
HTPG_BACSU3.157e-3345.20Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_BORGA4.123e-3347.16Chaperone protein htpG OS=Borrelia garinii GN=htpG... [more]
HTPG_RHIEC5.385e-3340.88Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_RHOSR1.200e-3243.41Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC32007C07EF RVDevelop1 Citrus clementina cDNA clone C32007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920358 ID=FC920358; Name=FC920358; organism=Citrus clementina; type=EST; length=765bp
TTCGCTTTATAAAAATCTCTCTGCGCAAGCAAAAGCAAAAGCAAAAGCAA
TTCTCTTCGGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTATTCTGTGT
TGTGAGGAAGAGCAATGGCGGACACTGAGACATTCGCATTCCAGGCAGAG
ATCAACCAGCTGTTGAGTTTGATCATCAATACTTTCTACAGCAACAAGGA
GATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGATGCTTTGGACAAGA
TTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCGATGGACAACCAGAG
CTTTTCATCAGAATCATCCCTGACAAGGCTAACAAGACGCTCACTATTGT
TGATAGCGGTATCGGCATGACCAAAGCAGATTTGGTAAATAATTTGGGTA
CAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGGG
GCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTTA
CCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAGC
AATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGAT
GTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATGACTCTGTACCTCAA
GGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAATTAGGACCTTGTGAA
GAGCACTCTGAATCATCAGCTCCCCTATTACTCTGGACTGAGAGACACTG
AGAAGAATTAGCGAT
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