FC920364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 36/77 (46.75%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR----NTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 226 +R+RL+IA EL+ +PSI+F+DEPTSGLD+ +A+ ++ ++ N+ RT++ +IHQPS ++FE FD L+LL +G Sbjct: 607 ERRRLSIATELIVDPSILFIDEPTSGLDSHSASELITKLKQLANNSTKGQRTIIFSIHQPSAELFEQFDNLILLHQG 683
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNI 361 +R+R++I V+L+ NP I+ +DEPTSGLD+ A +++T+ R V+ ++HQP DIF FD L+LL G IY G H +++YF A+ G P + + NPA + +++ +I Sbjct: 217 ERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVLISLHQPRSDIFRLFD-LVLLMTSGTPIYLGAAQH----MVQYFTAI-GYPCPRYS-NPADFYVDLTSI 327
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: WHITE_ANOAL (Protein white OS=Anopheles albimanus GN=W PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 58/229 (25.33%), Postives = 108/229 (47.16%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNI--SVENQLGIDFAEVYADSSLHQRNKELIKELS----------TPPPGSSDLYF--------PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYW 634 +RKR E + +P ++ DEPTS LD+ A V++ ++ G+T++ TIHQPS +++ FD +LL+ G V + G ++ ++F + G+P YNPA + +++ I + E + ++ ++ +++I+ S T ++D YF T Y + TQF W+ + S ++P +R T ++A G IY+ Sbjct: 252 ERKRTAFRSETLTDPHLLLCDEPTSSLDSFMAQSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDRILLVAEG--VAFLG----SPYQSADFFSQL-GIP-CPPNYNPADFYVQMLAIAPNKETECRETIKKICDSFAVSPIARDIIETASQVNGDGGIELTRTKHTTDPYFLQPMEGVDSTGYRASWWTQFYCILWRSWLSVLKDPMLVKVRLLQTAMVASLIGSIYF 472
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNI 361 +R+R++I V+L+ NP I+ +DEPTSGLD+ A ++RT+ R V+ ++HQP DIF FD L+LL G IY G H +++YF ++ G P + + NPA + +++ +I Sbjct: 239 ERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRLVLISLHQPRSDIFRLFD-LVLLMTSGTPIYLGVAQH----MVQYFTSI-GYPCPRYS-NPADFYVDLTSI 349
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 63/244 (25.82%), Postives = 109/244 (44.67%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGN------ISVENQLGIDFA---EVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLT----QFRACFWKQY-------WSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQICRIF 679 +RKR++I E++ NPS++F+DEPTSGLD+ A ++ + GRTVV TIHQPS G +Y G LG + ++YF +V G + E NP+ ++L++ N IS +G D + E + + L+ + G DL + S T + +W+Q+ R+ ++ ++ +++ GL++W + QI +F Sbjct: 196 ERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELARGGRTVVTTIHQPS---------------KGNPVYFG-LGSNA---MDYFASV-GYSPLVERINPSDFLLDIANGKPLLVISCWPSVGSDESQRPEAMKAALVAFYKTNLLDSVINEVKGQDDLCNKPRESSRVATNTYGDWPTTWWQQFCVLLKRGLKQRRHDSFSGMKVAQIFIVSFLCGLLWWQTKISRLQDQIGLLF 419
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 61/230 (26.52%), Postives = 108/230 (46.96%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEV-----GNISVENQLGIDFAEVYADSSLHQRN-------KELIK------ELSTPPPGSSDLYFPT--KYSQPFLTQFRACFWKQYWSYW-RNPQYNAIRFGMTLVIAIFFGLIYW 634 +R+R++I ++++ +P ++F+DEPTSGLD+ A +V++ ++ +G V+ +IHQPS I D L++L G V P+ L +F + G P I E N + L+V G+ L ++F E + + + KE I +L + G++ + T Y+ P L + K+Y W R P+ +R G +V + +YW Sbjct: 221 ERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPV-----SLPSFFSSF-GRP-IPEKENITEFALDVIRELEGSSEGTRDL-VEFNEKWQQNQTARATTQSRVSLKEAIAASVSRGKLVSGSSGANPISMETVSSYANPPLAE-TFILAKRYIKNWIRTPELIGMRIGTVMVTGLLLATVYW 441
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDA-RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 247 +++R++IA ELV +P ++F+DEPTSGLDA A ++ VR + D RT+V +IHQP +IF FD+L+LL + G ++Y+G Sbjct: 534 EKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQPRSNIFYLFDKLVLLSK-GEMVYSG 613
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 60/236 (25.42%), Postives = 100/236 (42.37%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNISVENQLGIDFAEVYADS------SLHQRNK--------------------ELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYW-RNPQYNAIRFGMTLVIAIFFGLIYW 634 +R+R++I ++++ +P ++F+DEPTSGLD+ A +V++ ++ +G V+ +IHQPS I E D L++L RG V P ++ +P I E LE N + +DF E + + S Q NK +L+ S P S + + Y+ P L + K+Y W R P+ R +V +YW Sbjct: 229 ERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGF-FSDFGRPIPEKENISEFALDLVRELEGSNEGTKAL--VDFNEKWQQNKISLIQSAPQTNKLDQDRSLSLKEAINASVSRGKLVSGSSRSNPTSMETV--SSYANPSLFE-TFILAKRYMKNWIRMPELVGTRIATVMVTGCLLATVYW 458
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVGNI 361 +R+R++I V+L+ NP I+ +DEPTSGLD+ A ++ T+ R V+ ++HQP DIF FD L+LL G IY G + ++++YF ++ G P + + NPA + +++ +I Sbjct: 218 ERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFD-LVLLMTSGTPIYLG----AAQQMVQYFTSI-GHPCPRYS-NPADFYVDLTSI 328
BLAST of FC920364 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 28/81 (34.57%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 8 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 250 +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++ ++G ++ +IHQPS + D L+ L RG V P Sbjct: 236 ERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSP 316 The following BLAST results are available for this feature:
BLAST of FC920364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920364 ID=FC920364; Name=FC920364; organism=Citrus clementina; type=EST; length=710bpback to top |