FC920365

Overview
NameFC920365
Unique NameFC920365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.091e-24
Identity = 56/110 (50.91%), Postives = 81/110 (73.64%), Query Frame = 3 
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M S+ +T  FQ E+ Q+L L++++ YSNKEIFLRELISN+SDALDK+RF +L++ S  +   +L I I  ++   T++I D+GIG++  + V NLGTIA+SGTKEF+  L
Sbjct:    1 MVSKQQTMGFQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQINEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQL 110
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBH (Chaperone protein htpG OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.091e-24
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 3 
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEF 434
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    +   +I ++ DK N  L I D+GIGMTK +L NNLG IA+SG+ +F
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDNYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQF 102
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB1 (Chaperone protein htpG OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.091e-24
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 3 
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEF 434
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD S    +   +I ++ DK N  L I D+GIGMTK +L NNLG IA+SG+ +F
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDNYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQF 102
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 3 
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ EI QLL L+ ++ YSNKEIF+RELISN+SDALDK  + SLTD+   +      I I  DK +N+L+I D+GIGM + DL++NLGTIA+SGTK FME L   A
Sbjct:    6 FQTEIGQLLKLMTHSLYSNKEIFIRELISNASDALDKFNYLSLTDEKFKEENWSGKISIKLDKDDNSLTIGDNGIGMNEEDLMDNLGTIAKSGTKAFMENLTGDA 110
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 53/109 (48.62%), Postives = 80/109 (73.39%), Query Frame = 3 
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   T++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:    2 SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 53/109 (48.62%), Postives = 80/109 (73.39%), Query Frame = 3 
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   T++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:    2 SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 53/109 (48.62%), Postives = 80/109 (73.39%), Query Frame = 3 
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   T++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:    2 SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 53/106 (50.00%), Postives = 78/106 (73.58%), Query Frame = 3 
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+ ++ YSNKEIFLRELISN+SDA DK+R+E++ D    +  P L + +  D    TL+I D+GIGM+  + +++LGTIA+SGTK+F+  L+
Sbjct:    4 QTLSFQAEVAQLLHLVTHSLYSNKEIFLRELISNASDACDKLRYEAINDSGLYEDAPTLEVRVSFDPAAKTLTISDNGIGMSAQEAIDHLGTIAKSGTKDFVSKLS 109
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_POLNA (Chaperone protein htpG OS=Polaromonas naphthalenivorans (strain CJ2) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 53/108 (49.07%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:  126 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            + +T +FQAE+ QLL L+ ++ YSN +IFLRELISN+SDA DK+RFE+L D    +   EL + +  DK   TL+I D+GIGM++ + + +LGTIA+SGT++F+  L+
Sbjct:    2 QKQTLSFQAEVAQLLKLVTHSLYSNPDIFLRELISNASDACDKLRFEALNDAGLYENDSELKVRVSFDKAAKTLTITDNGIGMSQQEAIEHLGTIAKSGTRDFVAKLS 109
[Close]
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.732e-24
Identity = 50/103 (48.54%), Postives = 82/103 (79.61%), Query Frame = 3 
Query:  138 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            + F+ E+++LL L+I++ YSN+EIFLREL+SNSSDA++K+R+ES+++ +  +   +  I I  DK   T+++ D+GIGMT+ +++ NLGTIA+SGTK+F+E+L
Sbjct:    6 YTFETEVDKLLHLVIHSLYSNREIFLRELVSNSSDAIEKLRYESISNAALNEDDTDYAIRIDFDKDAKTITVSDNGIGMTEEEVIENLGTIAKSGTKKFLESL 108
The following BLAST results are available for this feature:
BLAST of FC920365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_LEGPA2.091e-2450.91Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_CLOBH2.091e-2455.45Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB12.091e-2455.45Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_SULNB2.732e-2457.14Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
HTPG_SHEB92.732e-2448.62Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB82.732e-2448.62Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB52.732e-2448.62Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_RHOFD2.732e-2450.00Chaperone protein htpG OS=Rhodoferax ferrireducens... [more]
HTPG_POLNA2.732e-2449.07Chaperone protein htpG OS=Polaromonas naphthaleniv... [more]
HTPG_FRATW2.732e-2448.54Chaperone protein htpG OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC32007D04EF RVDevelop1 Citrus clementina cDNA clone C32007D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920365 ID=FC920365; Name=FC920365; organism=Citrus clementina; type=EST; length=467bp
GACACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTTC
GCTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGA
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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