FC920365

Overview
NameFC920365
Unique NameFC920365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_PHOPR (Chaperone protein htpG OS=Photobacterium profundum GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.148e-22
Identity = 51/106 (48.11%), Postives = 76/106 (71.70%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+     +   ++ + +  +    TL++ D+GIGM + D++ +LGTIA+SGTK+F   L+
Sbjct:   11 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPDLFENDADIGVKLSFNAEAGTLTVSDNGIGMNRDDVIEHLGTIAKSGTKDFFSKLS 116          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.148e-22
Identity = 52/104 (50.00%), Postives = 79/104 (75.96%), Query Frame = 3
Query:  135 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            T++F A+ +++L+L+I++ Y +K++FLRELISN+SDAL+K+R  S  D+  L+  PEL I I  +K    L I D+GIGM + +LV NLGT+ARSGT++F+E+L
Sbjct:    9 TYSFDADASKVLNLVIHSLYRHKDVFLRELISNASDALNKLREASYFDQELLEDNPELEILISLNKEKKILEISDNGIGMDEKELVENLGTVARSGTEKFLESL 112          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.148e-22
Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            MA+  E   FQAE  QLL L+I++ YSNK+ FLREL+SN+SDALDK+R ES  +K       +L I I  DK   TL++ D+GIGMT+ ++V+ +GT+A+SGT E  + L    D
Sbjct:    1 MAAHVEQLEFQAEARQLLDLMIHSVYSNKDSFLRELVSNASDALDKLRLESFRNKDLDVDTSDLHIEIDVDKEARTLTVRDNGIGMTRDEVVSLIGTLAKSGTGELRQQLREAKD 115          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_GLUOX (Chaperone protein htpG OS=Gluconobacter oxydans GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.148e-22
Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 452
            E   F AE+ +LL L+++  YS++EIFLREL++N++DA DK RFE+LTD S L       I I PDK+   L+I D G+GMT  +L  NLGTIARSGT+ F E L A
Sbjct:   11 EKHEFSAEVGRLLDLVVHALYSDREIFLRELVANAADATDKRRFEALTD-SALALPENASIRINPDKSQKELTISDDGVGMTHDELAQNLGTIARSGTRAFGEKLNA 116          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.499e-22
Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            ET  FQAE  QLL L++++ YSNK++FLRELISN+SDALDK+R  S+ DK       +L I I  D+   TL++ D+GIGMT+ ++V  +GTIA+SGT E +  L    D
Sbjct:    4 ETLEFQAEARQLLQLMVHSIYSNKDVFLRELISNASDALDKLRLASMRDKDLDVDTSDLHIAIEVDQDARTLTVRDNGIGMTRDEVVQVIGTIAKSGTAELLRKLRETTD 113          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.499e-22
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 467
            MA   E   FQAE  QLL L+I++ YSNK+ FLRELISN+SDALDK+R E+  +K       +L I I+ DK   TL++ D+GIGM++ ++V  +GT+A+SGT E  + L    D +
Sbjct:    1 MAPHVEQLEFQAEARQLLDLMIHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIEIVVDKEARTLTVRDNGIGMSRDEVVRLIGTLAKSGTAELRQQLREAKDAN 117          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.958e-22
Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            + F ++AE+ QLL LI+++ Y++ EIFLREL+SN++DAL K RF SLTD   + A  E  IHI  DK      I DSGIGM++ +L+ NLGT+A+SGT  FM++L
Sbjct:   10 QEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNAADALSKARFSSLTDGGLMAAAGEDAIHITLDKEKLLFVIEDSGIGMSEDELIANLGTVAKSGTLGFMQSL 114          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.557e-22
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            + F ++AE+ QLL LI+++ Y++ EIFLREL+SN+SDAL K RF +LTD +      E  I I  D      +I D+GIGMT+ +L+ NLGT+ARSGT  FM+AL
Sbjct:   10 QEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNASDALSKARFSALTDDTMAKVSGEAAIRISLDAKTAAFAIEDTGIGMTEEELIANLGTVARSGTLGFMQAL 114          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.557e-22
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            M++  ET  FQAE  QLL L++++ YSNK+IFLRELISN+SDALDK+R  SL          +L I I  D    TL++ D+GIGM++ ++V  +GTIA+SGT E +  L    D
Sbjct:    1 MSTRVETLEFQAEARQLLQLMVHSIYSNKDIFLRELISNASDALDKLRIASLVKDGPRVDSADLRIEIEADVNARTLTVRDNGIGMSRDEVVGLIGTIAKSGTAELLRKLRESED 115          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.557e-22
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEF 434
            F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD+S +  + + +I I  DK N  L I D GIGMTK +L  NLG IA+SG+  F
Sbjct:    6 FKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKALTDESMIFNKEDYYIKITTDKENKMLIISDMGIGMTKEELEENLGVIAQSGSFTF 102          
The following BLAST results are available for this feature:
BLAST of FC920365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_PHOPR1.148e-2248.11Chaperone protein htpG OS=Photobacterium profundum... [more]
HTPG_NEOSM1.148e-2250.00Chaperone protein htpG OS=Neorickettsia sennetsu (... [more]
HTPG_MYCVP1.148e-2248.70Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_GLUOX1.148e-2252.34Chaperone protein htpG OS=Gluconobacter oxydans GN... [more]
HTPG_SALAI1.499e-2250.00Chaperone protein htpG OS=Salinispora arenicola (s... [more]
HTPG_MYCGI1.499e-2247.01Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]
HTPG_PROVI1.958e-2251.43Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_PELLD2.557e-2250.48Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_FRASC2.557e-2247.83Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_ALKMQ2.557e-2255.67Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]

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Properties
Property NameValue
Genbank descriptionC32007D04EF RVDevelop1 Citrus clementina cDNA clone C32007D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920365 ID=FC920365; Name=FC920365; organism=Citrus clementina; type=EST; length=467bp
GACACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTTC
GCTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGA
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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