FC920365

Overview
NameFC920365
Unique NameFC920365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.715e-22
Identity = 51/102 (50.00%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSEAELVAGDSNFKITVKGDKNNGQVIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.715e-22
Identity = 51/102 (50.00%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSEAELVAGDSNFKITVKGDKNNGQVIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.715e-22
Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ----PELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADV 464
            M+++ E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+  +K  LD +     +L I I  DK    L++ D+GIGMT+A++V+ +GT+A+SGT +  + L A  ++
Sbjct:    1 MSAQVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRLEAFRNKD-LDPRTVDTSDLHIEIEVDKNTRILTVRDNGIGMTRAEVVDLIGTLAKSGTAKLRQKLHAAKNL 119          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.269e-21
Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S +    + +     I +  DK N  + I D+GIGM K DL++NLGTIARSGT  F+++L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSHSELVASDSNFKITVKVDKDNWQIIIRDNGIGMNKEDLIDNLGTIARSGTANFLKSLS 109          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.269e-21
Identity = 50/97 (51.55%), Postives = 73/97 (75.26%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEF 434
            F+AE  +LL +++N+ YS KEIFLRELISN+SDA+DKI + +L+D S    + + FI +  +K + TL++ D+GIGMTK +L +NLGTIA+SG+  F
Sbjct:    6 FKAESKRLLEMMVNSIYSQKEIFLRELISNASDAIDKIYYRALSDDSITFNKDDYFIKVTANKEDRTLTVSDTGIGMTKEELESNLGTIAKSGSLAF 102          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.269e-21
Identity = 51/99 (51.52%), Postives = 72/99 (72.73%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 440
            F+AE  +LL ++IN+ Y+ KEIFLRELISN+SDA+DKI +++LTD S    Q   +I +  DK   TL++ D+GIGMTK +L  +LGTIA+SG+  F +
Sbjct:    6 FKAESKRLLDMMINSIYTQKEIFLRELISNASDAIDKIYYKALTDDSLTFDQDNYYIKVTADKEARTLTVTDTGIGMTKDELEQHLGTIAKSGSLAFKQ 104          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.657e-21
Identity = 48/106 (45.28%), Postives = 77/106 (72.64%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +   F A+  +LL L+I++ YSNKEIFLREL+SN++DA DK+RF++L+D S  +   +L + +  D    T++I D+GIGM++ +++ +LGTIA+SGT +F E L+
Sbjct:    5 QNHTFSADTGKLLKLMIHSLYSNKEIFLRELVSNAADAADKLRFKALSDGSLFENDGDLRVRLSFDADLKTITISDNGIGMSRDEVIEHLGTIAKSGTSDFFEQLS 110          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.657e-21
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M +  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   TL++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:    1 MNAHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.657e-21
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M +  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   TL++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:    1 MNAHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
BLAST of FC920365 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.657e-21
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M +  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   TL++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:    1 MNAHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
The following BLAST results are available for this feature:
BLAST of FC920365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_RICBR9.715e-2250.00Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB89.715e-2250.00Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_MYCLE9.715e-2245.83Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_RICAH1.269e-2150.00Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_BACHD1.269e-2151.55Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_BACA21.269e-2151.52Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HTPG_PSYIN1.657e-2145.28Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_MYCTU1.657e-2148.18Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA1.657e-2148.18Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCBP1.657e-2148.18Chaperone protein htpG OS=Mycobacterium bovis (str... [more]

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Properties
Property NameValue
Genbank descriptionC32007D04EF RVDevelop1 Citrus clementina cDNA clone C32007D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920365 ID=FC920365; Name=FC920365; organism=Citrus clementina; type=EST; length=467bp
GACACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTTC
GCTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGA
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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