FC920378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18 Identity = 49/98 (50.00%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV-VDDSTLEINGK---LIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGRL NDPFI+ YM YMF YDSTHG F G I+ + +E GK IKVF+ +DPAEI W + G +YV+E Sbjct: 5 KVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNGKISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIE 102
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 377 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 V +NGFGRIGRL NDPFI Y AYMFKYDSTHG F G ++ D + +NGK + VF+++DPA +PWG GVD ++ Sbjct: 4 VSVNGFGRIGRLVTRIAISRKDINLVAINDPFISTDYAAYMFKYDSTHGRFDGEVS-HDKDHIILNGKKVAVFNEKDPAALPWGKLGVDVAID 95
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 398 RIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 RIGRL NDPFID YM YMF+YDSTHG FKGT+ ++ L INGK I +F +RDP I WGD G +YVVE Sbjct: 1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKGTVK-AENGKLVINGKAITIFQERDPTNIKWGDAGAEYVVE 85
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 47/95 (49.47%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVF-KGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 K+GINGFGRIGRL NDPFI +YM YMFKYDS HG + K + V D TL K + VF R+P E PWG+ G +YVVE Sbjct: 4 KIGINGFGRIGRLVARVALMSDDIELVAVNDPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVE 98
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 47/95 (49.47%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFK-GTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 K+GINGFGRIGRL NDPFI YM YMFKYDS HG +K + V D TL K + VF R+P EIPWG+ G ++VVE Sbjct: 7 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVE 101
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAE 95
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAE 95
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAE 95
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAE 95
BLAST of FC920378 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 374 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVE 655 KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V D L +NGK I+V ++RDPA + W + GVD V E Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAE 95 The following BLAST results are available for this feature:
BLAST of FC920378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920378 ID=FC920378; Name=FC920378; organism=Citrus clementina; type=EST; length=657bpback to top |