FC920380

Overview
NameFC920380
Unique NameFC920380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: V240_FOWPV (Putative ankyrin repeat protein FPV240 OS=Fowlpox virus GN=FPV240 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  293 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            D  + LH A   G    VE LL  D    + + + ++G  P+H A    N+ ++ +L+++GAD ++ N    T LH A     +K +ELL+   A  N +D  GCT L    S G++ +C +L++ GA +D
Sbjct:   66 DIESELHEAVEEGDVVKVEELL--DSGKFINDVIYKKGNTPLHLATISKNLDMMRLLIARGADTDVPNTDRFTPLHLAVMSKDIKGIELLLDHRACTNIEDCYGCTPLIIAMSKGDTEVCRMLLDSGANID 194          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: UACA_HUMAN (Uveal autoantigen with coiled-coil domains and ankyrin repeats OS=Homo sapiens GN=UACA PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            R  LH+AA  GH   ++ LL  +         D +G   +H AA     + +++L   GA VN K+  GRT L  A       I +LLI RGA +NS+DK   TAL  G   G     E+LI+ GA++
Sbjct:  102 RNALHLAAKYGHALCLQKLLQYNCPTE---HADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADI 226          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: UACA_CANFA (Uveal autoantigen with coiled-coil domains and ankyrin repeats OS=Canis familiaris GN=UACA PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 47/128 (36.72%), Postives = 65/128 (50.78%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            R  LH+AA  GH   ++ LL  +         D +G   +H AA     + +++L   GA VN K+  GRT L  A       I +LLI RGA+INS+DK   TAL  G   G     E+L++ GA+V
Sbjct:  104 RNALHLAAKYGHALCLQKLLQYNCPTE---HADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMCRPAICQLLIDRGAEINSRDKQNRTALMLGCEYGCKDAVEVLLKNGADV 228          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: TRPA1_CAEEL (Transient receptor potential cation channel subfamily A member 1 homolog OS=Caenorhabditis elegans GN=trpa-1 PE=2 SV=5)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 46/133 (34.59%), Postives = 65/133 (48.87%), Query Frame = 2
Query:  287 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            N+D+ T LH AA  G    V  LL  D    ++   DE G + +H AA  G+    ++LL  GAD   KN   +T L  A   G L+  + L+++GA+I S      T LH  A  GN ++    I EG  +D
Sbjct:  504 NEDEETALHRAAIGGQTGAVRQLLEWD--IRLLLMKDEMGNSALHLAARSGHDATTKVLLDNGADKEAKNSYQKTPLQVAVDSGKLETCQRLVAKGAQIESSSDTK-TVLHTAAFYGNESIVRYFIAEGVTID 633          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: FEM1B_DROME (Protein fem-1 homolog B OS=Drosophila melanogaster GN=Fem-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGA 676
            T L VAA  GH ++V++L+   ++   +N   +   +P+ +A   G + IVE L+  GADVN  N      L  AA KG   +V+ L+  G++ N +   G TALH  A +G+  +   L++ GA
Sbjct:   93 TALWVAAGMGHLQIVKMLV---QAGAAINHNTKAQSSPLRAACYEGRLDIVEFLIDNGADVNATNLFNNNTLMIAAYKGHHLVVKTLLQNGSRANDQALCGATALHYAAESGHLDVVVALLDHGA 214          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ASB10_MOUSE (Ankyrin repeat and SOCS box protein 10 OS=Mus musculus GN=Asb10 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 47/126 (37.30%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK-DKVGCTALHRGASTGNSALCELLIEEGA 676
            T LHVAAS GH EV+E+LL      +        G   +H A S G+   V +LL  GAD N  +  G+  LH     G L+ VELL+  GA+++ + +    T LH  A  G+  L +LL+  GA
Sbjct:  118 TPLHVAASRGHTEVLELLLRRRAKPDSAPG----GRTALHEACSAGHAACVRVLLVAGADPNTLDQDGKRPLHLCRGPGILECVELLLKFGAQVDGRTEDEEETPLHIAARLGHVELADLLLRWGA 239          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANR26_MOUSE (Ankyrin repeat domain-containing protein 26 OS=Mus musculus GN=Ankrd26 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 51/170 (30.00%), Postives = 75/170 (44.12%), Query Frame = 2
Query:  188 IKDKDL---FKAAETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            I DKD+    KAA  GD +                R+  DRT LH+A + GHPEVV +L+   E    ++A D E    +  A          +LL  GAD N+ +  G TALHYA       +   L++  A I +K+K   T +          + E L+++ A + A
Sbjct:   43 IHDKDMGKIHKAASVGDVAKVQHILILGKSGVND-RDKKDRTALHLACAYGHPEVVTLLV---ERKCEIDARDSESSTALIKAVQCQEEECAAILLDHGADPNVMDSSGNTALHYAVYSENTSMAAKLLAHNANIEAKNKDDLTPMLLAVKENKQHIVEFLVKKKASIHA 208          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: Y9043_DICDI (Ankyrin repeat-containing protein DDB_G0279043 OS=Dictyostelium discoideum GN=DDB_G0279043 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  308 LHVAASCGHPEVVEILLSVDESANV-VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            LH A   G+ E V+ ++   +S NV +   D  G  P+H AA +GN+ I + LL KG D+N +N+ G T +  A  +G ++ V+ LISRGA ++  D    T LH      +  L  +L++ G+ +DA
Sbjct:   39 LHEAIINGNFEDVKKMI---DSGNVNLEEGDFGGLHPLHFAARMGNIAIGQYLLDKGVDINAENNYGSTPILEAVRRGEVEFVKFLISRGANLSIGDIDDNTPLHLAVMCEDGELIPILLDAGSPLDA 163          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: INVS_DANRE (Inversin OS=Danio rerio GN=invs PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGA 676
            T L  A   GH +V+   L++ +    V+ VD +G + +H AA  GN  + E+L+  G   NL++  GRT L  AA  G++  + LLI   A  N +DK G TALH   + G     +LL+  GA
Sbjct:  385 TPLFRACEMGHRDVI---LTLIKGGARVDLVDIDGHSALHWAALGGNAEVCEVLMENGISPNLQDQAGRTPLQCAAYAGYINCMALLIQHDADPNIQDKEGRTALHWSCNNGYLDAVKLLLGCGA 506          

HSP 2 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  293 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 673
            + RT    AA  G  +V++I+L + +  ++ N  D+ G   +H+AA  G+V+ V +LL +G  V+  +    T L  A   G   ++  LI  GA+++  D  G +ALH  A  GN+ +CE+L+E G
Sbjct:  314 EGRTAFMWAAGKGSNDVIKIMLDLKKDIDI-NMTDKYGGTALHAAALSGHVSTVRLLLEQGGMVDPLDVMKHTPLFRACEMGHRDVILTLIKGGARVDLVDIDGHSALHWAALGGNAEVCEVLMENG 439          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_MUNRE (Cortactin-binding protein 2 OS=Muntiacus reevesi GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 679
            TLL  AA+ G+  ++ +LL+  E    +N   E+G + ++SAA  G+   V +LL+  A VN+ +  G T L  AA++G  K VELLI+  A IN     G T L+     GN    +LL+E G +
Sbjct:  705 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQVNVADTNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTD 828          
The following BLAST results are available for this feature:
BLAST of FC920380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
V240_FOWPV1.659e-1132.06Putative ankyrin repeat protein FPV240 OS=Fowlpox ... [more]
UACA_HUMAN1.659e-1135.94Uveal autoantigen with coiled-coil domains and ank... [more]
UACA_CANFA1.659e-1136.72Uveal autoantigen with coiled-coil domains and ank... [more]
TRPA1_CAEEL1.659e-1134.59Transient receptor potential cation channel subfam... [more]
FEM1B_DROME1.659e-1133.60Protein fem-1 homolog B OS=Drosophila melanogaster... [more]
ASB10_MOUSE1.659e-1137.30Ankyrin repeat and SOCS box protein 10 OS=Mus musc... [more]
ANR26_MOUSE1.659e-1130.00Ankyrin repeat domain-containing protein 26 OS=Mus... [more]
Y9043_DICDI2.167e-1135.16Ankyrin repeat-containing protein DDB_G0279043 OS=... [more]
INVS_DANRE2.167e-1136.00Inversin OS=Danio rerio GN=invs PE=2 SV=1[more]
CTTB2_MUNRE2.167e-1136.51Cortactin-binding protein 2 OS=Muntiacus reevesi G... [more]

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Properties
Property NameValue
Genbank descriptionC32007F01EF RVDevelop1 Citrus clementina cDNA clone C32007F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920380 ID=FC920380; Name=FC920380; organism=Citrus clementina; type=EST; length=691bp
GGGGAAGGAGTAAAGTGACGAACCGCGCACCGGGTGAGAACCGGACACAA
CCGAACCGCACCATACCATTGCGCACCGCTTTCGACTTGCAACTAGCTCG
CCGCTGGACCAAATCACACCGTCAAAACTCTAATTCTCGGCAAATTGACA
GTACAATTCCGGTATGGACATGGACATCGATCAAACAATCAAGGACAAAG
ACCTCTTCAAAGCCGCCGAAACTGGAGATTCCTCAACATTCAAATCCCTC
TCAAAACAGCAGCTCTTAAAATCTCTCTCCTTGCGGAACGACGACGACCG
CACCCTCCTCCACGTCGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAA
TATTGTTGAGTGTTGATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAA
GAAGGGTGGGCTCCGATTCATTCTGCGGCTAGCATTGGCAATGTGACAAT
CGTGGAAATGTTGTTAAGCAAAGGAGCTGATGTAAATTTGAAGAATGATG
GTGGGCGAACCGCTCTTCACTATGCTGCCAGCAAGGGATGGTTGAAGATT
GTGGAACTTCTGATCTCACGTGGTGCAAAAATTAACTCCAAGGACAAGGT
TGGTTGCACAGCATTGCACCGGGGAGCTAGTACAGGGAATTCAGCATTGT
GTGAACTCTTAATTGAAGAAGGAGCAGAGGTTGATGCTACT
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