FC920380

Overview
NameFC920380
Unique NameFC920380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2223 contig Ccv1_Contig2223:1278..1968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANR23_HUMAN (Ankyrin repeat domain-containing protein 23 OS=Homo sapiens GN=ANKRD23 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            RT LH A   GH ++V  LL    + +  + +D     P+  A   G++ I++ LL++GA VN ++  G T LH A        +E LI  GA +N++DK G TALH     G+    +LL+  GAE+
Sbjct:  145 RTALHWACLKGHSQLVNKLLVAGATVDARDLLDR---TPVFWACRGGHLVILKQLLNQGARVNARDKIGSTPLHVAVRTRHPDCLEHLIECGAHLNAQDKEGDTALHEAVRHGSYKAMKLLLLYGAEL 269          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANKS6_RAT (Ankyrin repeat and SAM domain-containing protein 6 OS=Rattus norvegicus GN=Anks6 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  308 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKIN-------------SKDK-VGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            L +AA+ GH  +V  LL    S   VN+ +  GW+ +  AA  G+ ++  +LL  GADVN +N  G + L  A+  G L +V+LL+  GA ++             S+D+ +G TAL      G+ A+  LL+E GA+ + T
Sbjct:   73 LQLAAAGGHEPLVRFLLRRGAS---VNSRNHYGWSALMQAARCGHASVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGATVDHRNPSGESTASGGSRDELLGITALMAAVQHGHEAVVRLLMEWGADPNHT 211          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: Y1087_RICFE (Putative ankyrin repeat protein RF_1087 OS=Rickettsia felis GN=RF_1087 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  368 ESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            + ++V+N ++++    +H A   G   IVE LL KGA+ N++N+ G T LH+AA  G ++ +E LI  GA I+S DK   T L    ++GN+   +L ++  A +  T
Sbjct:    8 DQSSVINYINDQKL--LHLAIRAGYKNIVEYLLKKGANPNIQNNNGETTLHFAAMNGCVRTIECLIKSGAIIDSFDKFERTPLELAINSGNTDAVKLFLQYEATIGNT 113          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: LITA_LATTR (Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 670
            T LH+AA     +V + L+ + E    +NA D+ G+ P+H + S  + T   ++ +  A +N+K+  G T LH A  +  L + +LL  +GA +N  D  G T LH  A TGN  + + L+ +
Sbjct:  570 TPLHLAARRDLTDVTQTLIDITEID--LNAQDKSGFTPLHLSISSTSETAAILIRNTNAVINIKSKVGLTPLHLATLQNNLSVSKLLAGKGAYLNDGDANGMTPLHYAAMTGNLEMVDFLLNQ 690          

HSP 2 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  287 NDDDR---TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLS-KGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            ND D    T LH AA  G+ E+V+ LL+  +  N+  A  E+ W P+H A       + E LLS +  ++ L+ +GG   LH A++ G  ++V  L+++ A +      G +ALH G    N  +   L+E+GA V+
Sbjct:  662 NDGDANGMTPLHYAAMTGNLEMVDFLLN-QQYININAATKEKKWTPLHLAILFKKNDVAERLLSDENLNIRLETNGGINPLHLASATGNKQLVIELLAKNADVTRLTSKGFSALHLGIIGKNEEIPFFLVEKGANVN 797          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: KDIS_HUMAN (Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            RN+  +T L +AA  G+ E+V+ L  +   AN  N  D + W  + SA+  G+V IVE LL  G ++  ++ GG TAL +A  KG   +VELL+S GA  +         +   A  G++ +  LL++ GA+V+ +
Sbjct:   34 RNECGQTPLMIAAEQGNLEIVKEL--IKNGAN-CNLEDLDNWTALISASKEGHVHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGAKVNCS 166          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ASB2_BOVIN (Ankyrin repeat and SOCS box protein 2 OS=Bos taurus GN=ASB2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            R   + T L++A   GH + ++ LL      ++ N   E    P++ A    NV  V +L+   AD N + + G TALH + ++  L+++E+L+S GAK+ +K+  G T L   A +G       L + GA+++
Sbjct:  166 RTLQEETALYLATCRGHVDCLQFLLQAGAEPDISNKSRE---TPLYKACERKNVEAVRILVQYKADTNHRCNRGWTALHESVARNDLEVMEILVSGGAKVEAKNAYGITPLFVAAQSGQLEALRFLAKYGADIN 296          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANS1A_HUMAN (Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens GN=ANKS1A PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            +N+D+ T LH AA  GH EVV++LL       + N   E    P+  AA  G + +V+MLL+   ++   N    T LH AA  G   +V++L+  G   N + ++G +ALH  A  G + + ++L+  G +V+
Sbjct:  145 QNNDNETALHCAAQYGHTEVVKVLLEELTDPTMRNNKFE---TPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVQVLLDAGMDSNYQTEMG-SALHEAALFGKTDVVQILLAAGTDVN 274          

HSP 2 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 2
Query:  323 SCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG---AKINSKDKVGCTALHRGASTGNSALCELLIEE 670
            S  HP  +  LLS+    NV N VD  G+ P+H AA  G+  +VE+LL   A  N+ +  G   LH AA KG  +IV LLI +G    ++N ++    TALH  A  G++ + ++L+EE
Sbjct:   56 SSSHP--LSSLLSMWRGPNV-NCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYGHTEVVKVLLEE 171          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANKS6_MOUSE (Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus GN=Anks6 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 2
Query:  308 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKI--------------NSKDKVGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            L +AA+ GH  +V  LL    S   VN+ +  GW+ +  AA  G+V++  +LL  GADVN +N  G + L  A+  G L +V+LL+  GA +              +  + +G TAL      G+ A+  LL+E GA+ + T
Sbjct:   73 LQLAAAGGHEPLVRFLLRRGAS---VNSRNHYGWSALMQAARCGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAIVDHHTPSGESPATGGSGDELLGITALMAAVQHGHEAVVRLLMEWGADPNHT 211          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: YL093_MIMIV (Putative ankyrin repeat protein L93 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L93 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 2
Query:  335 PEVVEIL-LSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTAL----HYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            P  +EI+ L +D+ A++ N  + EGW  +  A    N+  +++LL K AD+N K+  G TAL     YA +   ++I++LL+ +GA IN+ +  G TAL       N    +LL+++ A+++A
Sbjct:  265 PNSIEIIKLLLDKGADI-NTGNGEGWTALMFACKYANIEAIKLLLDKNADINAKDKIGLTALMLACKYANTPNSIEIIKLLLDKGADINTGNGEGWTALMFACKYANIEAIKLLLDKNADINA 386          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: V222_FOWPV (Putative ankyrin repeat protein FPV222 OS=Fowlpox virus GN=FPV222 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  344 VEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            +EI   + ++  +VN  + +   P+H A+S G+  +VE+LL  GA+ N     G T+LHY+ S   L I ELLI  G  +N  +K   TAL       +  L  LL+++GA+ +A
Sbjct:  117 LEIAKMLIQNGALVNMNNMKNITPLHIASSSGSYKMVELLLLHGANTNALTSYGETSLHYSVSSNDLNISELLIENGTNVNVANKDSITALIIAVEIMSIDLVRLLLDKGADTNA 231          
The following BLAST results are available for this feature:
BLAST of FC920380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
ANR23_HUMAN2.167e-1135.16Ankyrin repeat domain-containing protein 23 OS=Hom... [more]
ANKS6_RAT2.167e-1133.80Ankyrin repeat and SAM domain-containing protein 6... [more]
Y1087_RICFE2.830e-1135.19Putative ankyrin repeat protein RF_1087 OS=Rickett... [more]
LITA_LATTR2.830e-1132.52Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrode... [more]
KDIS_HUMAN2.830e-1134.56Kinase D-interacting substrate of 220 kDa OS=Homo ... [more]
ASB2_BOVIN2.830e-1129.85Ankyrin repeat and SOCS box protein 2 OS=Bos tauru... [more]
ANS1A_HUMAN2.830e-1132.84Ankyrin repeat and SAM domain-containing protein 1... [more]
ANKS6_MOUSE2.830e-1133.10Ankyrin repeat and SAM domain-containing protein 6... [more]
YL093_MIMIV3.697e-1133.33Putative ankyrin repeat protein L93 OS=Acanthamoeb... [more]
V222_FOWPV3.697e-1134.78Putative ankyrin repeat protein FPV222 OS=Fowlpox ... [more]

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Properties
Property NameValue
Genbank descriptionC32007F01EF RVDevelop1 Citrus clementina cDNA clone C32007F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920380 ID=FC920380; Name=FC920380; organism=Citrus clementina; type=EST; length=691bp
GGGGAAGGAGTAAAGTGACGAACCGCGCACCGGGTGAGAACCGGACACAA
CCGAACCGCACCATACCATTGCGCACCGCTTTCGACTTGCAACTAGCTCG
CCGCTGGACCAAATCACACCGTCAAAACTCTAATTCTCGGCAAATTGACA
GTACAATTCCGGTATGGACATGGACATCGATCAAACAATCAAGGACAAAG
ACCTCTTCAAAGCCGCCGAAACTGGAGATTCCTCAACATTCAAATCCCTC
TCAAAACAGCAGCTCTTAAAATCTCTCTCCTTGCGGAACGACGACGACCG
CACCCTCCTCCACGTCGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAA
TATTGTTGAGTGTTGATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAA
GAAGGGTGGGCTCCGATTCATTCTGCGGCTAGCATTGGCAATGTGACAAT
CGTGGAAATGTTGTTAAGCAAAGGAGCTGATGTAAATTTGAAGAATGATG
GTGGGCGAACCGCTCTTCACTATGCTGCCAGCAAGGGATGGTTGAAGATT
GTGGAACTTCTGATCTCACGTGGTGCAAAAATTAACTCCAAGGACAAGGT
TGGTTGCACAGCATTGCACCGGGGAGCTAGTACAGGGAATTCAGCATTGT
GTGAACTCTTAATTGAAGAAGGAGCAGAGGTTGATGCTACT
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