FC920380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685 R+LLH+AA+CG E + +LL N D G P+H AA G + LL ADVN+ N+ G TA+H+ A G +++ L+ ++ +D +G TALH G+ L++ GA+++ Sbjct: 66 RSLLHIAANCGSVECLVLLLKRGADPNYQ---DISGCTPLHLAARNGQKKCMSKLLEYNADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVTNVDVEDAMGQTALHVACQNGHKTTVLCLLDSGADIN 191
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685 R+LLH+AA+CG E + +LL N D G P+H AA G + LL ADVN+ N+ G TA+H+ A G +++ L+ ++ +D +G TALH G+ L++ GA+++ Sbjct: 66 RSLLHIAANCGSVECLVLLLKRGADPNYQ---DISGCTPLHLAARNGQKKCMSKLLEYNADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVTNVDVEDAMGQTALHVACQNGHKTTVLCLLDSGADIN 191
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_PONAB (Cortactin-binding protein 2 OS=Pongo abelii GN=CTTNBP2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664 +D + L+ AA GH + V +LLS + VNA D+ G+ P+ +AA+ G+ VE+L++ A++N DGG+T L+ A G + V+LL+ G + K G T +H TGN +LL+ Sbjct: 742 EDGHSALYSAAKNGHTDCVRLLLSAEAQ---VNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECVKLLLEAGTNRSVKTTDGWTPVHAAVDTGNVDSLKLLM 863 HSP 2 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 2 Query: 302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 673 TLL AA+ G+ ++ +LL+ E +N E+G + ++SAA G+ V +LLS A VN + G T L AA++G + VELLI+ A IN G T L+ GN +LL+E G Sbjct: 712 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLSAEAQVNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECVKLLLEAG 833
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_RAT (Integrin-linked protein kinase OS=Rattus norvegicus GN=Ilk PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_PONAB (Integrin-linked protein kinase OS=Pongo abelii GN=ILK PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_MOUSE (Integrin-linked protein kinase OS=Mus musculus GN=Ilk PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_HUMAN (Integrin-linked protein kinase OS=Homo sapiens GN=ILK PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_CAVPO (Integrin-linked protein kinase OS=Cavia porcellus GN=ILK PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ILK_BOVIN (Integrin-linked protein kinase OS=Bos taurus GN=ILK PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 314 VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682 + C V + L +D + N +N D+ G++P+H A G +VEML+ +GA +N+ N G T LH AAS G IV+ L+ A IN+ ++ G LH G + E L+ GA V Sbjct: 4 IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_RHIFE (Cortactin-binding protein 2 OS=Rhinolophus ferrumequinum GN=CTTNBP2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 2 Query: 290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGA 676 +D + L+ AA GH + V +LL+ + V+A D+ G+ P+ +AA+ G+ VE+L + AD+N DGG+T L+ A G + ++LL+ G+ + K G T LH TGN +LL+ A Sbjct: 742 EDGHSALYSAAKNGHTDCVRLLLNAEAQ---VDAADKNGFTPLCAAAAQGHFKCVELLTAYDADINHTADGGQTPLYLACKNGNKECIKLLLEAGSDRSVKTSDGWTPLHAAVDTGNVDSVKLLMYHSA 867 The following BLAST results are available for this feature:
BLAST of FC920380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920380 ID=FC920380; Name=FC920380; organism=Citrus clementina; type=EST; length=691bpback to top |