FC920383

Overview
NameFC920383
Unique NameFC920383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.005e-39
Identity = 83/166 (50.00%), Postives = 106/166 (63.86%), Query Frame = 3
Query:   81 NIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            N  ++  +   +   N  + TTN G  + +D +SL  G RGP LLED+ L EK+ HF  ERIPER+VHARG  A G+F    D S LT AD       +TPV +R STV   RGS +T+RD  GFAVKFYT EGN+DL+GN++PVFFI+DA  FPD +HA    P+
Sbjct:    2 NKKLEQLEKFKTNDKNPVYSTTNTGVSLSDDANSLKAGPRGPTLLEDFVLREKITHFDHERIPERIVHARGTGAHGYFLSYKDHSKLTKADFLSKQDKKTPVFIRISTVQGPRGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQ 167          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.313e-39
Identity = 81/148 (54.73%), Postives = 100/148 (67.57%), Query Frame = 3
Query:  126 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*P 569
            N  FMT++ G P+  D +SL+ G RGP LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A      G QTPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA  P
Sbjct:   51 NDAFMTSDVGGPI-EDQNSLSAGERGPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKP 197          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.990e-39
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 3
Query:  126 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*P 569
            N  F+T++ G P+  D +SL VG RGP LLED+   +K+  F  ER+PER VHARG  A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD+IHA  P
Sbjct:   50 NDTFLTSDVGGPI-EDQNSLQVGDRGPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKP 196          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.452e-38
Identity = 76/147 (51.70%), Postives = 106/147 (72.11%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AGAPV ++ +  T G RGP+LL+D   +EKLAHF RE IPER +HA+G++A G F  THDI+  T A +F   G +T + +RFSTV  ERG+ +  RD RGF+++FYT +GNWDL+GN+ PVF++RD +KFPD+ H    +P+
Sbjct:    7 LTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPR 153          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.896e-38
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  135 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*P 569
            ++TT+ G P+  D  SL  G+RG  LLED+   +K+  F  ER+PER VHARGA A G F    D S++T A    A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IHA  P
Sbjct:   52 YLTTDVGGPI-EDQQSLKAGARGSTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKP 195          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.205e-38
Identity = 76/142 (53.52%), Postives = 99/142 (69.72%), Query Frame = 3
Query:  153 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            GAPV +  +S+T G RGP+L++D + +E++AHF RE IPER +HA+G+ A G F  T+DI+  TCA +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   FP + H    NPK
Sbjct:   10 GAPVSDRENSMTAGPRGPLLMQDIYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTCASIFAEVGKQTEMFARFSTVAGERGAGDAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPK 151          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.605e-37
Identity = 77/147 (52.38%), Postives = 106/147 (72.11%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +T + G  + ++ +SL+ G++GP+L++DY L+EKLAH  RERIPER VHA+G+ A G  + T D+S  T A +F+  G  TP+ +RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ P FFIRDA KFPD IH    +P+
Sbjct:    4 LTNDFGNIIADNQNSLSAGTKGPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQK-GEITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPR 149          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 154.836 bits (390), Expect = 2.738e-37
Identity = 79/150 (52.67%), Postives = 98/150 (65.33%), Query Frame = 3
Query:  129 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DL+ N+ PVFFIRD  KFP  IH    NP+
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPE 151          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37
Identity = 78/147 (53.06%), Postives = 101/147 (68.71%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +T   GAPV ++ +SLT G RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD  KFPD+  A   +P+
Sbjct:   15 LTMGNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPR 161          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.100e-37
Identity = 90/177 (50.85%), Postives = 110/177 (62.15%), Query Frame = 3
Query:   54 ITVAKSSARNIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSR---GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            +T A SS +   +D  K     T  +  +TT+ G      +  L + S    GP LLED    E++  F  ERIPERVVHARG+ A G F+     S LT A +      +TPV VRFSTV+  RGS +T+RD RGFAVKFYT EGNWDL+GN+IPVFFI+DAIKFPDVIHA  P P
Sbjct:   16 LTSAPSSKK---VDDLKNEFKETDKSARLTTDYGVKQTTADDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEP 189          
The following BLAST results are available for this feature:
BLAST of FC920383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATB_DICDI1.005e-3950.00Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATB_ASPFU1.313e-3954.73Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATB_ASPOR4.990e-3954.05Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATA_PSEAE1.452e-3851.70Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATB_EMENI1.896e-3853.79Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_STAXY7.205e-3853.52Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_CAMJE1.605e-3752.38Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_CANTR2.738e-3752.67Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_HAEIN4.670e-3753.06Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CAT1_NEUCR6.100e-3750.85Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32007F04EF RVDevelop1 Citrus clementina cDNA clone C32007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920383 ID=FC920383; Name=FC920383; organism=Citrus clementina; type=EST; length=579bp
GACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATA
ATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTA
CAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATG
CCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGA
GGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTT
TGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTG
CTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCT
GATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTC
CACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAG
GATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGT
AACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGT
GATCCATGCTTTCTAACCTAATCCAAAGT
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