FC920383

Overview
NameFC920383
Unique NameFC920383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:2..580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 3.692e-42
Identity = 87/149 (58.39%), Postives = 108/149 (72.48%), Query Frame = 3
Query:  132 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            P +TT AGAPV ++ +SLT G RG ++L+DY L+EKLAH  RERIPERVVHA+G  A G  + T DIS  T A   + PG +TP++ RFSTV  E+G+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD  KFPD IH    +PK
Sbjct:    5 PTITTTAGAPVPDNQNSLTAGPRGGIMLQDYQLIEKLAHQNRERIPERVVHAKGWGAFGSLKITGDISQYTRAKCLQ-PGAETPMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPK 152          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.331e-41
Identity = 83/162 (51.23%), Postives = 112/162 (69.14%), Query Frame = 3
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            +D +K+  S +    ++TT+AG P+  D+ SL  G RGP LLED+   +K+ HF  ER+PER VHARGA A G F    D +++T A    + G +TPV VRFSTV   RGS +T+RD  GFA +FYT EGN+D++GN+IPVFFI+DAI FPD++HA  P+P
Sbjct:   44 LDQFKVEDSNS----YLTTDAGGPI-QDDASLKAGERGPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAYGTFTSYADWTNITAASFLNSKGKETPVFVRFSTVAGSRGSADTVRDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLVHAVKPSP 200          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.963e-41
Identity = 82/146 (56.16%), Postives = 103/146 (70.55%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            +TTN G  + +D +SL  GSRGP LLED+ L EK+ HF  ERIPER+VHARG++A G+F+    +S +T AD    P   TPV VRFSTV    GS +T+RD RGFA KFYT EG +DL+GN+ P+FFI+DA KFPD +HA  P P
Sbjct:   80 LTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEP 225          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.094e-41
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            + TN G  + ++ +SL  G+RGP LLED+ + EK+ HF  ERIPER+VHARG  A G+F+   + + LT A   + P   TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DAIKFPD +HA  P P
Sbjct:   44 LRTNQGVKIADNQNSLKAGARGPSLLEDFIMREKITHFDHERIPERIVHARGTGAHGYFQSYGNHADLTKAGFLQDPDKITPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEP 189          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.094e-41
Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            +TT+ G P+  D HSL  G+RGP LLED+   +K+ HF  ER+PER VHARGA A G F   ++ S++T A    A G QTPV VRFSTV   RGS ++ RD  GFA + YT EGN+D++GN++PVFFI+DAI+FPD+IHA  P P
Sbjct:   60 LTTDVGGPI-EDQHSLKAGNRGPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAHGVFTSYNNWSNITAASFLNAAGKQTPVFVRFSTVAGSRGSVDSARDIHGFATRLYTDEGNFDIVGNNVPVFFIQDAIQFPDLIHAVKPQP 204          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.188e-40
Identity = 83/140 (59.29%), Postives = 102/140 (72.86%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIH 557
            +TT AGAPV ++ +S T G  GPVL++D  L+EKLAHF RERIPERVVHARGA A G F  T D+S  T A      G +T   +RFSTV    G+ + +RDPRG+A+KFYT EGN+DL+GN+ PVFFI+DAIKFPD IH
Sbjct:    6 LTTEAGAPVADNQNSETAGVGGPVLVQDQLLLEKLAHFNRERIPERVVHARGAGAYGTFTLTRDVSRWTRAAFLSEVGKRTETFLRFSTVAGSLGAADAVRDPRGWALKFYTEEGNYDLVGNNTPVFFIKDAIKFPDFIH 145          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.456e-40
Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AGAPV ++N+ +T G RGP+LL+D   +EKLAHF RE IPER +HA+G+ A G F  THDI+  T A +F   G +T +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWD++GN+ PVF++RD +KFPD+ H    +P+
Sbjct:    6 LTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPR 152          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.513e-40
Identity = 80/147 (54.42%), Postives = 104/147 (70.75%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +T   G P+ ++ +S T G RGP++L+D  L+EKLAHF RE IPER +HA+G+ A G F  THDI+  T A +F   G QT   VRFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD +KFPD+ HA   +P+
Sbjct:    6 LTAANGRPIADNQNSQTAGPRGPIMLQDPWLIEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTRAAIFSQVGKQTECFVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPR 152          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.513e-40
Identity = 84/150 (56.00%), Postives = 102/150 (68.00%), Query Frame = 3
Query:  126 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            N  FMTT+ G  +  +  SL  G RG  LLED+   +KL HF  ERIPERVVHARGA A G F    D S++T A    A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IH+  P+P
Sbjct:   51 NGQFMTTDFGGNI-EEQFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSP 199          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.698e-40
Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AG PV ++ +  T G RGP LL+D   +EKLAHF RE IPER +HA+G+ A G F  THDI+  T A LF   G QT +  RF+TV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF+RD +KFPD+ HA   +P+
Sbjct:    5 LTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKLFSEIGKQTELFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPR 151          
The following BLAST results are available for this feature:
BLAST of FC920383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_RHIME3.692e-4258.39Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_ERYGR5.331e-4151.23Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATE_ECOLI6.963e-4156.16Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATE_PSEPU9.094e-4156.16Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATB_AJECA9.094e-4154.79Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
BCA_STRVL1.188e-4059.29Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_PROMI3.456e-4053.74Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_BACFR4.513e-4054.42Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CAT3_NEUCR4.513e-4056.00Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_VIBF17.698e-4055.10Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]

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Properties
Property NameValue
Genbank descriptionC32007F04EF RVDevelop1 Citrus clementina cDNA clone C32007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920383 ID=FC920383; Name=FC920383; organism=Citrus clementina; type=EST; length=579bp
GACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATA
ATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTA
CAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATG
CCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGA
GGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTT
TGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTG
CTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCT
GATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTC
CACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAG
GATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGT
AACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGT
GATCCATGCTTTCTAACCTAATCCAAAGT
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