FC920387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.180e-41 Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 92 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+ IDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+ P Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNP 175
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.180e-41 Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 92 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+ IDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+ P Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNP 175
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4) HSP 1 Score: 164.851 bits (416), Expect = 3.563e-40 Identity = 85/189 (44.97%), Postives = 119/189 (62.96%), Query Frame = 2 Query: 95 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYTPRKSHSCP 658 K +++VV GHVDSGKST G ++++LG I+ R +++ EAA K SF YAW+LD + ER RG+ +D+A FE+ K + DAPGHRDFI MI G S AD AVL++DS+ FE G ++GQTREHA L LG+ +++ NK+D + +S+ R+ EI VS +L K VG+ H P Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVP 361
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.037e-39 Identity = 83/189 (43.92%), Postives = 118/189 (62.43%), Query Frame = 2 Query: 92 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCP 658 ++ H N+ +IGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+ IDIA +F T Y T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y ++ Y ++V+EV L +V + + P Sbjct: 3 DEQHQNLAIIGHVDHGKSTLVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFSTDTYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIGELIVAVNKMDLV--DYGESEYKQVVEEVKDLLTQVRFDSENAKFIP 182
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.531e-39 Identity = 85/185 (45.95%), Postives = 116/185 (62.70%), Query Frame = 2 Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 M KEKTH+N+ IGHVD GKST GHL+ G I ++ ++ E K+ +V+DKL ERERG+ ID+A KFET KY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMD YS+ +++E+ +E+ + + VG+ P Sbjct: 1 MAKEKTHMNLAFIGHVDHGKSTLVGHLLLLEGAIAEQQLDEGED----------KFRFVMDKLGEERERGVTIDLAHAKFETQKYEYTVVDCPGHRDFVKNMITGASQADAAVLVVAANDGIMP-------QTKEHIFLSRTLGINQLIIAINKMDVV--DYSEDKFNELKEELGALISTVGFKP 166 HSP 2 Score: 24.2534 bits (51), Expect = 1.531e-39 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 634 PEKVPFVPISGFE 672 P VPF+P+S FE Sbjct: 166 PSDVPFIPVSAFE 178
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.994e-39 Identity = 85/185 (45.95%), Postives = 114/185 (61.62%), Query Frame = 2 Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 M K K HIN+ IGHVD GKST GHL+ K G I ++ ++ E K+ +V+DKL ERERG+ ID+A KF T KY TV+D PGHRDF+KNMITG SQAD VL++ + G QT+EH L+ TLG+ Q+I NK+D Y +A+++E+ EVS+ +K VG+ P Sbjct: 1 MAKTKEHINLAFIGHVDHGKSTLVGHLLLKAGAIAEQQLDDGEN----------KFRFVMDKLGEERERGVTIDLAHQKFSTKKYDYTVVDCPGHRDFVKNMITGASQADAGVLVVAADDGVMP-------QTKEHVFLSKTLGINQLIVAINKIDLV--DYDEAKFNELKDEVSALIKTVGFNP 166 HSP 2 Score: 24.2534 bits (51), Expect = 1.994e-39 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 631 HPEKVPFVPISGFE 672 +P VPF+P+S FE Sbjct: 165 NPADVPFIPVSAFE 178
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.597e-39 Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 2 Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 M KEK HIN+ IGHVD GKST G L+Y G I+ + ++ + K+ ++D L+ ERERG+ ID+A KFET Y T++D PGHRDF+KNMITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GY Sbjct: 1 MAKEKEHINLAFIGHVDHGKSTLVGRLLYDTGVIEDK----------DLGEGEDKFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLV--DYDENRYEEVKQEVAELLKTIGY 164 HSP 2 Score: 23.0978 bits (48), Expect = 2.597e-39 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 637 EKVPFVPISGFE 672 +++PF+PIS FE Sbjct: 167 DEIPFIPISAFE 178
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38 Identity = 83/185 (44.86%), Postives = 113/185 (61.08%), Query Frame = 2 Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 M KEK H+N+ IGHVD GKST GHL+ + G I ++ + E K+ +V+D+L ERERG+ ID+A KFET KY T++D PGHRDF+KNMITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P Sbjct: 1 MAKEKEHMNLAFIGHVDHGKSTLVGHLLLQAGAIAEQQLAEGED----------KFRFVMDRLSEERERGVTIDLAHAKFETDKYEFTIVDCPGHRDFVKNMITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLV--NYDEEKFNALKDEVAALIKTVGYKP 166
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.704e-38 Identity = 77/176 (43.75%), Postives = 113/176 (64.20%), Query Frame = 2 Query: 95 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 622 K +N IGHVDSGKSTT G L Y+LG +DKR +E++EKEAA NK +F A++ DK AER+RGI I L T K+ ++D PGH+DF+KNM+TG SQAD AV+I+ ++ GFE+ + G + H +++ LG +++I C NKMD +++E+ E+ +K+ Sbjct: 44 KPRLNACFIGHVDSGKSTTVGMLSYQLGAVDKREMEKYEKEAALNNKETFYLAYLTDKTDAERKRGITITTTLVNLPTEKFNINILDCPGHKDFVKNMVTGASQADVAVVIVPAS--GFESCVGVGGMLKTHIMISGILGCEKLIVCVNKMDEIPENKRMEKFNEVSAEMLRIVKR 217
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.316e-27 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 395 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP-KYSKARYDEIVKEVSSYLKKVGYTPRK 643 GTSQAD A+L++ + GGFE SK+GQTREHALLAFTLGVKQMI NKMDATTP KYS+ R++EI EVS YLK VGY P K Sbjct: 1 GTSQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTPDKYSETRFNEIQAEVSRYLKTVGYNPEK 84 HSP 2 Score: 30.0314 bits (66), Expect = 1.316e-27 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 1 Query: 631 HPEKVPFVPISGF 669 +PEKVPFVPISGF Sbjct: 81 NPEKVPFVPISGF 93 The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bpback to top |