FC920387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_DESAH (Elongation factor Tu OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 59/154 (38.31%), Postives = 78/154 (50.65%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGH+D GK+T T + K AA F +DK ERERGI I A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTAAIT---------------KHAALRGFGKFVAFDEIDKAPEERERGITISTAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSADDGPMP-------QTREHILLARQVGVPSIVVFLNKCD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHLMU (Elongation factor Tu OS=Chlamydia muridarum GN=tuf PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 60/181 (33.15%), Postives = 92/181 (50.83%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 + K HINI IGHVD GK+T T + L G F+ +D E+ RGI I+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLADFRDYSSIDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISEEDAEL-VDLVEMELSELLEEKGY 165
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BRELN (Elongation factor Tu OS=Brevibacterium linens GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D E+ERGI I+++ +++T K + +DAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLADQYP----DLNEARAFDQ---VDNAPEEKERGITINVSHVEYQTEKRHYAHVDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYIVVALNKSD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLO (Elongation factor Tu OS=Bifidobacterium longum GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + E F E + +D E RGI I+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLI (Elongation factor Tu OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + E F E + +D E RGI I+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BIFLD (Elongation factor Tu OS=Bifidobacterium longum (strain DJO10A) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + E F E + +D E RGI I+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEFPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGI I+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGI I+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L + + +++ +D ERERGI I+ A ++ET + +D PGH D++KNMITG +Q D AVL++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMSLAALGQAKARKYDD---------------IDAAPEERERGITINTAHVEYETQDRHYAHVDCPGHADYVKNMITGAAQMDGAVLVVSAADGPMP-------QTREHILLAKQVGVPNIVVFMNKQD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 ++K H+NI IGHVD GK+T T L L + +++++ +D ER RGI I+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV M+ NK D Sbjct: 84 RKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNMVVFLNKQD 215 The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bpback to top |