FC920387

Overview
NameFC920387
Unique NameFC920387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig789 contig Ccv1_Contig789:131..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_METC4 (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 57/184 (30.98%), Postives = 97/184 (52.72%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYT 634
            + K  +  +  G VD GKST  G L++    I    +   ++++ +   +  +  +A ++D L+AERE+GI ID+A   F T +    V D PGH  + +NM TG S AD AV+++D+  G          Q+R HALL   LG++++    NKMD     +S+ +++ IV    ++   + +T
Sbjct:   20 QNKEVLRFITCGSVDDGKSTLIGRLLHDTKQIFDDQVTALQRDSRKHGTQGGEVDFALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHG-------LTRQSRRHALLVSLLGIRRVALAINKMDLV--GWSQDKFEAIVSGFQAFAAPLNFT 194          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_ECOSE (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain SE11) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 56/181 (30.94%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GI ID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+  ++ +++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKDYLTFAEQL 194          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_ECO24 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 56/181 (30.94%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GI ID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I K+  ++ +++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRKDYLTFAEQL 194          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_CHRVO (Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 613
            + K  +  +  G VD GKST  G L++     D ++I  FE + A + + S KY         A ++D L+AERE+GI ID+A   F T K    + D PGH  + +NM TG S ++ A+++ID+  G          QTR H+ +   LG++ +I   NKMD     YS+  Y+ I  E  ++
Sbjct:   20 ENKDMLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLAAIERDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRG-------VQTQTRRHSYIVSLLGIRHVIVAVNKMDLV--DYSEDVYNRIRDEYLTF 187          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_CELJU (Sulfate adenylyltransferase subunit 1 OS=Cellvibrio japonicus (strain Ueda107) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 628
            ++K  +  +  G VD GKST  G L++    I +  +E    ++++      K   A ++D L+AERE+GI ID+A   F T+K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     ++++ ++ I  +  ++  K+G
Sbjct:   20 EKKELLRFLTCGSVDDGKSTLIGRLLHDSKMIYEDQLEAVRADSSKHGTTGEKIDLALLVDGLQAEREQGITIDVAYRYFSTSKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHGVMT-------QTRRHSYIASLLGIKHIVVAINKMDLL--DFNESVFENIKADYLAFAAKLG 192          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_BUCAT (Sulfate adenylyltransferase subunit 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 58/181 (32.04%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625
            ++KT +  +  G VD GKST  G L++    I  D+    + + +           A V+D L++ERE+GI ID+A   F T K    + D PGH  + +NM TG S  D ++L++D+  G  E       QT  H+ ++  LG+K +I   NKMD     Y +  ++ I K+   + KK+
Sbjct:   17 QKKTLLKFLTCGSVDDGKSTLIGRLLHDTKQIYDDQLFFLKSDSKRHGTQGNEIDLALVVDGLQSEREQGITIDVAYRYFSTNKRKFIIADTPGHEQYTRNMATGASTCDLSILLVDARKGLSE-------QTYRHSFISTLLGIKYLIVAINKMDLV--NYKQEIFENIKKDFLIFSKKL 188          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_BUCAI (Sulfate adenylyltransferase subunit 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 58/181 (32.04%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625
            ++KT +  +  G VD GKST  G L++    I  D+    + + +           A V+D L++ERE+GI ID+A   F T K    + D PGH  + +NM TG S  D ++L++D+  G  E       QT  H+ ++  LG+K +I   NKMD     Y +  ++ I K+   + KK+
Sbjct:   17 QKKTLLKFLTCGSVDDGKSTLIGRLLHDTKQIYDDQLFFLKSDSKRHGTQGNEIDLALVVDGLQSEREQGITIDVAYRYFSTNKRKFIIADTPGHEQYTRNMATGASTCDLSILLVDARKGLSE-------QTYRHSFISTLLGIKYLIVAINKMDLV--NYKQEIFENIKKDFLIFSKKL 188          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_BUCA5 (Sulfate adenylyltransferase subunit 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=cysN PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 58/181 (32.04%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625
            ++KT +  +  G VD GKST  G L++    I  D+    + + +           A V+D L++ERE+GI ID+A   F T K    + D PGH  + +NM TG S  D ++L++D+  G  E       QT  H+ ++  LG+K +I   NKMD     Y +  ++ I K+   + KK+
Sbjct:   17 QKKTLLKFLTCGSVDDGKSTLIGRLLHDTKQIYDDQLFFLKSDSKRHGTQGNEIDLALVVDGLQSEREQGITIDVAYRYFSTNKRKFIIADTPGHEQYTRNMATGASTCDLSILLVDARKGLSE-------QTYRHSFISTLLGIKYLIVAINKMDLV--NYKQEIFENIKKDFLIFSKKL 188          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_UREPA (Elongation factor Tu OS=Ureaplasma parvum GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631
            + K H+NI  IGHVD GK+T T  +   L    + + + +                 +DK   ERERGI I+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G+
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISTVLAKKGQAIAQSYAD---------------VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGF 163          
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_UREP2 (Elongation factor Tu OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=tuf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = 2
Query:   89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631
            + K H+NI  IGHVD GK+T T  +   L    + + + +                 +DK   ERERGI I+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G+
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISTVLAKKGQAIAQSYAD---------------VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGF 163          
The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_METC41.556e-1930.98Sulfate adenylyltransferase subunit 1 OS=Methyloba... [more]
CYSN_ECOSE1.556e-1930.94Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO241.556e-1930.94Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_CHRVO1.556e-1933.70Sulfate adenylyltransferase subunit 1 OS=Chromobac... [more]
CYSN_CELJU1.556e-1931.32Sulfate adenylyltransferase subunit 1 OS=Cellvibri... [more]
CYSN_BUCAT1.556e-1932.04Sulfate adenylyltransferase subunit 1 OS=Buchnera ... [more]
CYSN_BUCAI1.556e-1932.04Sulfate adenylyltransferase subunit 1 OS=Buchnera ... [more]
CYSN_BUCA51.556e-1932.04Sulfate adenylyltransferase subunit 1 OS=Buchnera ... [more]
EFTU_UREPA2.033e-1933.70Elongation factor Tu OS=Ureaplasma parvum GN=tuf P... [more]
EFTU_UREP22.033e-1933.70Elongation factor Tu OS=Ureaplasma parvum serovar ... [more]

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Properties
Property NameValue
Genbank descriptionC32007F09EF RVDevelop1 Citrus clementina cDNA clone C32007F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bp
ACTCTCTCAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATAT
CATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACT
CACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCAC
CACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCG
AGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATAC
GCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTGCCAT
TGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCA
TTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACC
TCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCACCGGTGGTTT
TGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTG
CTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGAC
GCCACCACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGAAGGA
GGTCTCTTCCTACCTGAAGAAGGTTGGATACACCCCGAGAAAGTCCCATT
CGTGCCCATCTCTGGTTTCGAG
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