FC920387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+N+ IGHVD GK+T T + L K ++++ +D E+ RGI I+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITMTLAAQGKAQARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLARQVGVPSIVVFLNKVD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+N+ +GH+D GK+T T I K++ +R E ++ +DK ERERGI I A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D Sbjct: 8 RTKPHVNVGTVGHIDHGKTTLTA-------AITKQLAKRGRAEFVPFDQ--------IDKAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAADDGPMP-------QTREHILLSRQVGVPYIVVFLNKVD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGH+D GK+T T + L A K F+ +D E+ RGI I +A ++ET K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK+D Sbjct: 8 RSKPHVNIGTIGHIDHGKTTLTAAITKVL--------------AKHNPKNKFRSFDSIDNAPEEKARGITIAVAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVD 140
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_PICGU (Elongation factor Tu, mitochondrial OS=Pichia guilliermondii GN=TUF1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + K +E +F +D+ ER RGI I A +++T K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D Sbjct: 32 RSKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLSEKGGANFLDYGSIDRAPEERARGITISTAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHLVVFVNKVD 163
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_LACF3 (Elongation factor Tu OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=tuf PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L E + +D E+ERGI I+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAAKGLAKAEDYSD---------------IDAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKTD 140
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + K AE + F+ +D ERERGI I + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKAD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 60/154 (38.96%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H NI IGHVD GK+T T I K + ER A + +DK ERERGI I A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCD 140
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+N+ IGHVD GK+T T + + +D V EK A + +DK E+ RGI I+ A ++ T + + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITFTAAAMDPTV----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPARHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVD 140
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L K ++++ +DK E+ERGI I+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMVLAKEGKASATKYDE---------------IDKAPEEKERGITINTAHVEYETEVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKSD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CLOD6 (Elongation factor Tu OS=Clostridium difficile (strain 630) GN=tuf1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEK-EAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + +R++ EA + +DK ERERGI I A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QTREH LL+ +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKTLYDRYQLGEAVDFAN--------IDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSATDGPMP-------QTREHILLSRQVGVPYIVVFLNKCD 140 The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bpback to top |