FC920387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_RHOSR (Elongation factor Tu OS=Rhodococcus sp. (strain RHA1) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 63/181 (34.81%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625 + K H+NI IGHVD GK+T T I K + + + EA+ ++ +DK E+ RGI I+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ V ++++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDAYPDLNEASAFDE--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEIIELVEMEVREL 159
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_RHOOB (Elongation factor Tu OS=Rhodococcus opacus (strain B4) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 63/181 (34.81%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 625 + K H+NI IGHVD GK+T T I K + + + EA+ ++ +DK E+ RGI I+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ V ++++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDAYPDLNEASAFDE--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEIIELVEMEVREL 159
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_PHYMT (Elongation factor Tu OS=Phytoplasma mali (strain AT) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 ++K H+N+ IGHVD GK+T T + L K AE +S+ +DK K E+ERGI I+ +ET K + +D PGH D++KNMITG +Q D +L++ + G QTREH LLA +G+ ++I NK D Sbjct: 8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 61/154 (39.61%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 K K H+NI IGHVD GK+T T + L EK AE KR + +D ERERGI I + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 KTKPHVNIGTIGHVDHGKTTLTAAITAVLA----------EKGYAE--KRDYDQ---IDNAPEERERGITIATSHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKED 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_LACGA (Elongation factor Tu OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tuf PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T + L E + + +D E+ERGI I+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK+D Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVKYIVVFLNKVD 140
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_KINRD (Elongation factor Tu OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGH+D GK+T T I + + ++F E+NK S +DK ER+RGI I IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH +LA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITRVLHDKFP----ELNKASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVILARQVGVPYIVVALNKAD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_DESRM (Elongation factor Tu OS=Desulfotomaculum reducens (strain MI-1) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV 604 + K H+NI IGHVD GK+T T + L ++R+++ +D ERERGI I+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + D V+E+ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITVVLSTSGGASVKRYDE---------------IDNAPEERERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKSDMVDDEELLELVDMEVREL 157
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 61/187 (32.62%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYTPRKS 646 +++ H+N+ IGHVD GK+T T + L +R+E +DK ER RGI I+ A ++ T + + D PGH D++KNMITGT+ D +L++ +T G QTREH LLA +GV+ ++ NK DA S A +V+ E+ L ++GY ++ Sbjct: 43 RDRPHVNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAV----SDAELLPLVELELRELLAEMGYDAERT 203
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BIFAA (Elongation factor Tu OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + E + E + +D E RGI I+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEYPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCD 141
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_BIFA0 (Elongation factor Tu OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=tuf PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 57/154 (37.01%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K H+NI IGHVD GK+T T I K + + + E + +D E++RGI I+IA +++T K + +D PGH DF+KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHDEYPDLNPEYDFNQ------IDAAPEEQQRGITINIAHIEYQTAKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLAPQVGVPKILVALNKCD 141 The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bpback to top |