FC920398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_ACTSZ (Phosphoglycerate kinase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=pgk PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.276e-34 Identity = 83/181 (45.86%), Postives = 118/181 (65.19%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSEL-LGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D + D R+RA +PT+K + GAKV+++SHLGRP P+ SL+P+V L+ LGV V++ + + ++ G +++LENVR +K E+KNDPE KK A+L D++V DAFG+AHRA AST GVA++ + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVASDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLNNAELGVPVRLVQNYLDG------VDVQAGEIVVLENVRVNKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEYAPVACAGPLLAAELDAL 175
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_SHISS (Phosphoglycerate kinase OS=Shigella sonnei (strain Ss046) GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_SHIFL (Phosphoglycerate kinase OS=Shigella flexneri GN=pgk PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_SHIF8 (Phosphoglycerate kinase OS=Shigella flexneri serotype 5b (strain 8401) GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_SHIDS (Phosphoglycerate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_SHIBS (Phosphoglycerate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_LEIXX (Phosphoglycerate kinase OS=Leifsonia xyli subsp. xyli GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 87/174 (50.00%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 141 LKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKND----PEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 L GKRV VR DLNVPL D ITDD RVRA++PT+ L+ GAKV + SHLGRP+G +YSL P+ RLSELLG V A+D +G + V+ + +G V LLEN+RF+ E D FA +LA+ D +V+D FG HR AS +AK L PS AG L+ ELD L Sbjct: 12 LAGKRVVVRCDLNVPLKDG-KITDDGRVRASIPTLHALIAQGAKVAIVSHLGRPEGAPDAQYSLAPVAQRLSELLGKPVTFASDTVGAGAAEAVSGLEDGDVALLENLRFNPGETSKDEGEREAFAAELAAFGDAFVSDGFGVVHRKQASVYELAKAL-PSAAGALIATELDVL 183
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_ECOLI (Phosphoglycerate kinase OS=Escherichia coli (strain K12) GN=pgk PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_ECOLC (Phosphoglycerate kinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=pgk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_ECOL6 (Phosphoglycerate kinase OS=Escherichia coli O6 GN=pgk PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 114 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647 SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHLGRP ++SL P+V L + L V++ D + ++ EG +++LENVRF+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174 The following BLAST results are available for this feature:
BLAST of FC920398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920398 ID=FC920398; Name=FC920398; organism=Citrus clementina; type=EST; length=663bpback to top |