FC920427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 45/169 (26.63%), Postives = 83/169 (49.11%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 YT+TV + L + ++ +N QFPGP + V D I +NV N+ + + W+G++Q +N W DG T CPI P S++ YK + + ++ + RA +G I D + +++G+W+K + +++ + + +G + D + ING Sbjct: 24 YTFTVREVPYTKLCSTKAILTVNSQFPGPIIKVHKGDTIYVNVQNRASENITMHWHGVEQPRNPWSDGPEYITQCPIRPGSDFLYKVIFSIEDTTVWWHAHSSWTRAT-VHGLIFVYPRPPQILPFPKADHEVPIILGEWWKRDVREVVEEFVRTGGAPNVSDALTING 191
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 44/171 (25.73%), Postives = 75/171 (43.86%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 R Y + + ++ L + ++ +NG+FPGPR+ DN+ + V+N + + W+GI+Q ++ W DG T CPI +Y Y F Q G+ ++ RA YG + +L G+WF + +++Q L +G D NG Sbjct: 30 RHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNG 199
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 42/160 (26.25%), Postives = 76/160 (47.50%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSL 629 R Y + +T + L + ++ +NGQFPGP + D +I+NV N ++ + W+G+ Q +N W DG T CPI P N+TY+ ++ G+ ++ + RA +G I D + +++G+W+ + + LD + L Sbjct: 31 RHYDFFITETNYTRLCHEKSILTVNGQFPGPTIYARKGDLVIVNVHNNGNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILSEEEGTLWWHAHSDFDRAT-VHGAIVIHPKRGTTFPFKKPDKEIPVILGEWWNDD---IEHVLDKAQLL 186
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVE (Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 49/174 (28.16%), Postives = 76/174 (43.68%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQG 665 T+++ +SP G + +L NG FPGP + DN +NVI+ L +L W+G Q+ +W DG N CPI +++ Y F DQ G+++Y G G + D + T++ + DW+ T + G + P D LING G Sbjct: 31 TISNADVSPDGFTRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSDPHADLYDVDDETTIITLSDWYHTAASL-------GAAFPIGSDSTLINGLG 197
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 46/171 (26.90%), Postives = 80/171 (46.78%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 R Y + V + T + L + ++ +NGQFPGP + D I++ V+N + + W+GI+Q + W DG T CPI P NY + F Q G+ ++ L RA +G I + T+++ +W+K++ +++ + G + D ING Sbjct: 30 RHYKFNVMTNT-TKLCSSKPIVTVNGQFPGPTIVAREGDTILIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHILWLRAT-VHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDVEELINEASRIGTAPSASDAHTING 198
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_TRAVI (Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 50/179 (27.93%), Postives = 78/179 (43.58%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-----LTWNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTTFT 680 T+T+ +SP G ++ +++NG PGP + D LNVI+ L + + W+G Q+ +W DG N CPI ++ Y FQ DQ G+++Y G G D D T++ + DW+ K+ G + P D LING+G + T Sbjct: 30 TITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMVKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYHVAAKL-------GPAFPLGADATLINGKGRSPST 201
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 45/170 (26.47%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQ-TLDSGKSLPFPDGVLINGQ 662 +T+ V + T+S L Q + ++NG PGP + V D+++++V+N + W+GI + W DG + T CPI P Y Y+F Q G+ ++ RA YG + + +L G+W+ T+ L + + +G D ING+ Sbjct: 28 HTFNVQNLTVSRLCKRQVITVVNGSLPGPTIRVKEGDSLVIHVLNHSPHNITIHWHGIFHKLTVWADGPSMITQCPIQPGQRYAYRFNITGQEGTLWWHAHASFLRAT-VYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVVALEEAAIATGVPPNNSDAYTINGR 196
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_PYCCI (Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 52/179 (29.05%), Postives = 75/179 (41.90%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTTFT 680 T+T+ +SP G +E +++NG P P + D LNVI+ L +L W+G Q +W DGV N CPI ++ Y FQ DQ G+++Y G G D D T++ + DW+ K+ G P D LING G + T Sbjct: 30 TLTNAAVSPDGFSREAVVVNGITPAPLIAGQKGDRFQLNVIDNLTNHTMLKTTSIHWHGFFQHGTNWADGVSFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPQASLYDIDNDDTVITLADWYHVAAKL-------GPRFPLGADATLINGLGRSPGT 201
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 37/153 (24.18%), Postives = 72/153 (47.06%), Query Frame = 3 Query: 207 QEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 ++++ +NGQ+PGP + V D + + V N++ + W+G++Q + W DG T CPI +YTY+F+ +DQ G+ + RA+ YG + +++G+W+ + + + + +G D +NG Sbjct: 47 KQLLTVNGQYPGPTVAVHEGDIVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRAS-VYGAFIIYPRQPYPFSGSHIQSEIPIILGEWWNDDVDNVEKAMMKTGAGAKVSDAYTLNG 198
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 49/194 (25.26%), Postives = 78/194 (40.21%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGS------------YFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLINGQGHTTFTVIRK 692 R YT+ V ++ L V + + +NGQFPGP+L V D +++ V N ++ W+GI Q +N W DG T CPI +Y Y F Q G+ + Y P ++ + G+ ++ G+WF + ++ Q L +G D NG T+ K Sbjct: 38 RHYTFNVQMTNVTRLCVTKSIPTVNGQFPGPKLVVREGDRLVVKVHNHMNYNVSFHWHGILQLRNGWADGPSYITQCPIQGGGSYVYDFTVTGQRGTLWWHAHFSWLRVHLYGPLVILPKRGEGFPFPRPYKELP------------PIMFGEWFNADTEAVINQALQTGAGPNISDAYTFNGLPGPTYNCSSK 219 The following BLAST results are available for this feature:
BLAST of FC920427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920427 ID=FC920427; Name=FC920427; organism=Citrus clementina; type=EST; length=705bpback to top |