FC920427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_TRAHI (Laccase OS=Trametes hirsuta PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 50/179 (27.93%), Postives = 77/179 (43.02%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGHTTFT 680 T+++ +SP G ++ +++N PGP + D LNVI+ L +L W+G Q+ +W DG N CPI ++ Y FQ DQ G+++Y G G D D T++ + DW+ T K+ G + P D LING G + T Sbjct: 30 TISNAEVSPDGFARQAVVVNNVTPGPLVAGNKGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFVNQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDVDNDDTVITLADWYHTAAKL-------GPAFPLGADATLINGLGRSPST 201
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 42/169 (24.85%), Postives = 75/169 (44.38%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 +T+ V ++ L + + N Q PGP ++V D ++++ +N P L W+G+ Q ++ W DG T CPI P+ N+TY+F Q G+ ++ + + RA I + +L+G+W+ N + +G D + ING Sbjct: 26 HTFKVGGTKITQLCMNSVIYTANQQLPGPTIEVTEGDTLVVHAVNDSPYPLSLHWHGVYQLRSGWNDGANKITQCPIQPSGNFTYRFNITGQEGTLWWHAHSSLLRATIYGALIIKPRNGPSGYPFPEPYEEIPILLGEWWNRNVDDVENDGYLTGLGPQISDALTING 194
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 44/159 (27.67%), Postives = 72/159 (45.28%), Query Frame = 3 Query: 186 LSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLING 659 + PL Q + NG PGP ++V D +++NVIN + W+G+ Q K+ W DG + T CPI P N+TY+F Q G+ + + RA +G + + ++ W+ T+ ++L+ + P D LING Sbjct: 39 VKPLCKEQIIPAANGSLPGPTINVREGDTLVVNVINNSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPGYNFTYQFDITGQEGTLLWHAHVVNLRAT-LHGALVIRPRSGRPYPFPKPYKEVPIVFQQWWDTDVRLLQL-----RPAPVSDAYLING 191
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_BOTFU (Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 3 Query: 147 PYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYG 491 P Y V + TLS GV + + NG PGP++ D++I++V NKL + W+GI+Q N+ DGV G T CPI P TYKF D GS +Y ++ G +G Sbjct: 61 PKTGYWLVVQNTTLSADGVSRPTLNFNGTIPGPQITADWGDDVIVHVTNKLTSNGTSIHWHGIRQLNNAQYDGVPGITQCPIAPGGTLTYKFHA-DNYGSSWYHSHFILQYGDGLFG 176
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 42/171 (24.56%), Postives = 72/171 (42.11%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 R Y + V + L + ++ +NGQ PGP L D +++ V N + L W+G++Q + W DG T CPI +Y Y F Q G+ ++ RA YG + + ++ G+W+ + +++ Q + +G D ING Sbjct: 31 RHYEFNVQMANATRLCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNVAHNISLHWHGVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLRAT-VYGALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTING 200
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 42/171 (24.56%), Postives = 77/171 (45.03%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 R Y + V + +++ L + ++ +NGQ+PGP L D++ + V+N + W+GI+Q + W DG T CPI P +Y Y+F Q G+ ++ RA +G + + ++ G+W+ + ++ Q L +G D +NG Sbjct: 30 RQYLFDVQTTSVTRLCSTKSIVTVNGQYPGPTLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSYVYRFTITGQRGTLWWHAHISWLRAT-VHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVISQALQTGGGPNISDAYTLNG 199
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC4_THACU (Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 47/182 (25.82%), Postives = 80/182 (43.96%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-----LTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFT-LLIGDWFKTNHKILRQTLDSGKSL----PFPDGVLINGQG 665 R Y + + + ++P G + ++ +NG PG + D + +NV N+L P + + W+G+ Q + +DG T CPI N +YTY+ Q G+ +Y G G + D T +++ DW+ T +L + + S + P PD LING+G Sbjct: 23 RNYKFDIKNVNVAPDGFQRPIVSVNGLVPGTLITANKGDTLRINVTNQLTDPSMRRATTIHWHGLFQATTADEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPNDPHKSRYDVDDASTVVMLEDWYHTPAPVLEKQMFSTNNTALLSPVPDSGLINGKG 204
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 35/109 (32.11%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRA 476 R Y + +T + L + ++ +NGQFPGP + D II+NV N ++ + W+G+ Q +N W DG T CPI P N+TY+ ++ G+ ++ + RA Sbjct: 32 RHYDFFITETNYTRLCHEKSILTVNGQFPGPTIYARKGDFIIVNVHNNGNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILFEEEGTLWWHAHSDFDRA 140 The following BLAST results are available for this feature:
BLAST of FC920427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920427 ID=FC920427; Name=FC920427; organism=Citrus clementina; type=EST; length=705bpback to top |