FC920434

Overview
NameFC920434
Unique NameFC920434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:38..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 63/175 (36.00%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  169 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI +  PV++
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVR 157          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25
Identity = 63/175 (36.00%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  169 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI +  PV++
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVR 157          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25
Identity = 69/196 (35.20%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  214 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ------------AKLAASSIGSIVNETSSSNGSESVAAAT------VDVQASSV-----------------------EPKIISVQPSCA----SELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVI 666
            GP+LC   CGF+G+  T  MCS CYK+ + +Q              +    S   S+    +S N  E  A +T      V V A  V                       EP +    PS +    S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K  PV+
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVV 205          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25
Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  223 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            LC NNCG   + AT NMC KC+   ++    A       GSI+  ++ S    S  A  V      + P+ I           ++V+ + ++  +RCS C+K+VGLTGF+CRCG L+C  HRYSD+H+C +DY+TA R+AI +  PV+K
Sbjct:   25 LCTNNCGVTANPATNNMCQKCFNASLVS---AAAGVVESGSILKRSARSVNLRSSPAKVV------IRPREI-----------DAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVK 153          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 69/208 (33.17%), Postives = 100/208 (48.08%), Query Frame = 1
Query:  211 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVI 666
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K  PV+
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 215          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 69/208 (33.17%), Postives = 100/208 (48.08%), Query Frame = 1
Query:  211 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVI 666
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K  PV+
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 215          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 1
Query:  187 ETGCQAPPEGPIL-CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            E G +   E P L C N CGFFGS  T  +CSKCY+  ++ Q  A  AA+          S+   + V  A          P+ + V             AK K   SRC++C + VGL GF+CRCG ++C +HRYSD+H+C +DYR A RDAI +A PV++
Sbjct:    2 EQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQ---------SAEHDQVVLPA----------PEGVPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVR 141          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  169 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEP--KIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVI 666
            E  +       A  E   LC + CGFFGS  T NMCSKCY+D +        A S + S    +SSS  + S    TV +  ++  P   +   +    +  S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++DKH C FD++ + R+ I K  P+I
Sbjct:   62 EEEEASTAAAAAADEQLALCSSGCGFFGSKETNNMCSKCYRDHLK-------ATSPLFS----SSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLI 216          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21
Identity = 53/151 (35.10%), Postives = 75/151 (49.67%), Query Frame = 1
Query:  217 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            P LCI  CGFF +  T N+CSKCY D +  +    LA  ++        ++  +E V A          E  ++  +  CA                    CKK+VGL GF CRCG+L+  SHRY ++H+CP DY++AA D + K  PV+K
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLATFNV--------NTKAAEEVTAQ---------EATVLGSKGGCA--------------------CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVK 118          
BLAST of FC920434 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 1
Query:  226 CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKATPVIK 669
            C   CG +G+    N+CS CYK  +L+   A                                   EP+    Q  C    S +VE +P +   RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+    P+I+
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPAL--------------------------------RFEPETEQSQ-CCPPTNSPAVEEEPVK-KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIR 123          
The following BLAST results are available for this feature:
BLAST of FC920434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP1_ORYSJ2.088e-2536.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI2.088e-2536.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_HUMAN2.727e-2535.20AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP5_ARATH3.562e-2538.93Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT3.938e-2433.17AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE3.938e-2433.17AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
SAP2_ORYSJ3.938e-2438.89Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ5.143e-2436.90Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH9.078e-2135.10Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ARATH2.093e-1732.43Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32008D03EF RVDevelop1 Citrus clementina cDNA clone C32008D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920434 ID=FC920434; Name=FC920434; organism=Citrus clementina; type=EST; length=703bp
GGACACCCGGAAAGGGAAACGAGCACGTCTCTAATCGGTTTTTGCCTGCT
CTCTCCCCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGAT
GCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCT
GTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCA
AGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTG
GAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATG
CTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGT
GAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTG
TTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCA
TCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGG
TCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCA
AATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGACAAA
CATAACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAA
AGCAACCCCTGTGATCAAGCTGAGAAGCTAGATAAATCTAGATTCATGGG
ATG
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