FC920435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.214e-35 Identity = 66/123 (53.66%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D + F+ +L S+NY+R+GFGH EE + + EY S +I++++ NG+ + G+V ++LAE++GFCWGVERAV +AYE R FP E+IWITNEIIHNP+VN+RL +MAV+ IPV G K F V Sbjct: 2 DTRAFKRSLHSSENYHRKGFGHGEEVNQQLQGEYQSSLIQQIRANGYRWQQGDVTIRLAEAFGFCWGVERAVALAYETRTHFPTERIWITNEIIHNPSVNERLRQMAVEFIPVVNGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNR3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain RCC307) GN=ispH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.214e-35 Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D + F+ +L S+ YNRRGFG EE + Q Y S++I+ ++ENG+E G V ++LAE++GFCWGVERAV IAYE R+ +P E+IWITNEIIHNP+VN L EM V IPVEEG K F V Sbjct: 2 DTRAFKRSLHHSERYNRRGFGRAEEVAGSLEQAYQSELIQSIRENGYELREGRVTIRLAEAFGFCWGVERAVAIAYETRRHYPTERIWITNEIIHNPSVNAHLVEMNVLFIPVEEGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH8102) GN=ispH PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.221e-34 Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG++ + G + V+LAE++GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAESLEQAYQSGLIGTIRDNGYKLSHGRLTVRLAEAFGFCWGVERAVAMAYETRKHYPAERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG+ G + V+LAE++GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAESLEQAYQSGLIGTIRDNGYRLEHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34 Identity = 63/123 (51.22%), Postives = 91/123 (73.98%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D K F+ +L S+NYNR+GFGH+ E + EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E IWITNEIIHNP+VN+R++EM V+ IP+E K F VV Sbjct: 2 DTKAFKRSLQHSENYNRKGFGHQAEVATQLQSEYQSNLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEHIWITNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34 Identity = 61/123 (49.59%), Postives = 94/123 (76.42%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D K F+ +L +S+NY+R+GFG E + +MN EY S +I+++++N +++ GNV + LA+++GFCWGVERAV +AYE R+ FP+E IWITNE+IH+P+VN+RLE+M ++ I V G+K F + Sbjct: 2 DTKAFKRSLQQSENYHRKGFGQTEAAMGVMNTEYQSSLIQQIRQNNYQWKQGNVTIHLAQAFGFCWGVERAVAMAYETRQHFPKESIWITNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQI 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.641e-34 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG++ T G + V LAE++GFCWGVERAV +AYE R+ +P E++WITNEIIHNP+VN L EM V IPVEEG K F V Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAENLEQAYQSGLIGTIRDNGYKLTHGRLNVHLAEAFGFCWGVERAVAMAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVLFIPVEEGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.641e-34 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D F+ +L SD YNRRGFG EE + Q Y S +I +++NG+ G ++V+LA+ +GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRAEEVAGSLEQAYQSSLIGSIRDNGYRLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.008e-33 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVV 626 D F+ +L SD YNRRGFG +E + Q Y S +I +++NG+ T G +KV+LAE++GFCWGVERAV +AYE R+ +P+E+IWITNEIIHNP+VN L EM V I VE G K F V Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRADEVAGSLEQAYQSSLIGSIRDNGYSLTHGRLKVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGV 124
BLAST of FC920435 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.143e-32 Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKAFDVVN 629 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVS 125 The following BLAST results are available for this feature:
BLAST of FC920435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920435 ID=FC920435; Name=FC920435; organism=Citrus clementina; type=EST; length=644bpback to top |