FC920452

Overview
NameFC920452
Unique NameFC920452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 59/174 (33.91%), Postives = 90/174 (51.72%), Query Frame = 1
Query:   79 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKS-NYNFEKPFLYLAR 585
            MA  +  + + P++KLV+VGDGG GK+    +     F   Y+PTI           N   I     DTAGQE+F  +R+ Y   G   +I++ VT + ++++V  +H+ + RV   E+ P++L  NKVD+ + R+V   Q      K N+ Y E SAK    N +K F  L R
Sbjct:    1 MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVR 173          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 50/166 (30.12%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCW----DTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN--IPIVLCGNKVDVKN-RQV-KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 591
            +KLV++G GG GK+    + +   F ++Y+PTI        +   C      C     DTAGQ+ +  +RD Y   GQ  + ++DVT+R +++ +      + RV +N  +PIVL GNK D++N R+V + +     +  ++ + E SAK   N ++ F  + R++
Sbjct:    7 YKLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDS-----YRRQCQVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREI 167          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROYA (Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROSI (Ras-like protein 1 OS=Drosophila simulans GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROME (Ras-like protein 1 OS=Drosophila melanogaster GN=Ras85D PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAS1_DROAN (Ras-like protein 1 OS=Drosophila ananassae GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 600
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RALB_RAT (Ras-related protein Ral-B OS=Rattus norvegicus GN=Ralb PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 47/162 (29.01%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  121 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC---ENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 591
            K+++VG GG GK+    + +  EF + YEPT   + +      +  +++    DTAGQE +  +RD Y+  G+  +++F +T   ++     +   + RV    + IP+++ GNK D+ + RQV  ++     ++  +QY E SAK+  N +K F  L R++
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREI 176          
BLAST of FC920452 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 1
Query:  121 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN---CGKI--RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 591
            K+ ++GD G GK++ V R +   F+    PTIG       F T    CG    +F  WDTAGQE+F  L   YY     A+I++D+T + ++  +  W ++L     ENI + + GNK D+ + R+V  K    + +       E SAK+  N E+ F  ++R++
Sbjct:    7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGAS-----FMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166          
The following BLAST results are available for this feature:
BLAST of FC920452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASM_RAT4.244e-1433.91Ras-related protein M-Ras OS=Rattus norvegicus GN=... [more]
RASB_DICDI4.244e-1430.12Ras-like protein rasB OS=Dictyostelium discoideum ... [more]
RAS1_DROYA4.244e-1429.88Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D ... [more]
RAS1_DROSI4.244e-1429.88Ras-like protein 1 OS=Drosophila simulans GN=Ras85... [more]
RAS1_DROME4.244e-1429.88Ras-like protein 1 OS=Drosophila melanogaster GN=R... [more]
RAS1_DROMA4.244e-1429.88Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROER4.244e-1429.88Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]
RAS1_DROAN4.244e-1429.88Ras-like protein 1 OS=Drosophila ananassae GN=Ras8... [more]
RALB_RAT4.244e-1429.01Ras-related protein Ral-B OS=Rattus norvegicus GN=... [more]
RAB31_RAT4.244e-1432.12Ras-related protein Rab-31 OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32008F01EF RVDevelop1 Citrus clementina cDNA clone C32008F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920452 ID=FC920452; Name=FC920452; organism=Citrus clementina; type=EST; length=656bp
GGTCTCTCTCTCTCTCTCTCTCTCAGTTCTGTGTTCAGACCGCGAACTTC
GTATTCTTTCGCACACAGTACTCAACTCATGGCTCTGCCAAGTCAGCAAA
CTGTTGATTACCCGAGCTTCAAACTCGTCATAGTCGGCGACGGTGGCACT
GGGAAGACTACCTTTGTGAAGAGGCATCTGACTGGGGAGTTTGAGAAGAA
GTATGAACCAACTATTGGTGTGGAGGTTCATCCGTTGGATTTCTTTACAA
ATTGTGGCAAAATCCGTTTCTACTGCTGGGACACTGCTGGCCAGGAAAAG
TTTGGTGGTCTTAGAGATGGTTATTACATCCATGGGCAATGTGCCATCAT
TATGTTTGATGTTACTGCCCGATTGACATACAAGAATGTCCCCACTTGGC
ACCGTGATCTTTGCCGGGTGTGTGAAAATATACCGATTGTTCTCTGTGGG
AACAAGGTTGATGTGAAGAATAGGCAAGTCAAGGCAAAGCAGGTTACCTT
CCACAGGAAGAAGAATCTACAGTACTATGAGATTTCTGCCAAGAGCAACT
ACAATTTTGAGAAACCTTTCTTGTACCTTGCCAGGAAGCTTGCTGGGGAC
CCAAATTTGCACTTCGTGGAATCTCCTGCTCTCGCTCCTCCAGAAGTACA
GATTGA
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