FC920456

Overview
NameFC920456
Unique NameFC920456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_ORENI (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Oreochromis niloticus GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.843e-82
Identity = 144/208 (69.23%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + ++GT++ H+  VT IAT     DMI++ASRDKSII+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSG+WDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYTIQ+ + HTEWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTVRGTLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQD-EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_RAT (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Rattus norvegicus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_PIG (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Sus scrofa GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_MOUSE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus musculus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_MACFA (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca fascicularis GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_HUMAN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Homo sapiens GN=GNB2L1 PE=1 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_CHICK (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Gallus gallus GN=GNB2L1 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_BOVIN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Bos taurus GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 304.679 bits (779), Expect = 3.143e-82
Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M E + L+GT++ H   VT IAT     DMI++ASRDK+II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLC
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.560e-80
Identity = 145/209 (69.38%), Postives = 166/209 (79.43%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKT-YGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            M+E L L+GT+  H   VT IAT   + D I++ASRDK++IVW LT++E T YG  ++RL GHSHF+ DVVLSSDG +ALSGSWD  LRLWDLA GK+ RRF GHTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECK+TIQE D HT+WVSCVRFSPN   P IVS  WDRTVKVWNL+NCKL+    GH GY+NTV VSPDGSLC
Sbjct:    1 MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQE-DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLC 208          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.754e-78
Identity = 134/208 (64.42%), Postives = 165/208 (79.33%), Query Frame = 1
Query:   76 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699
            MAE L+LKGT+  H   VT++AT ++N +M+++ SRDKS+I+W+LT++E +YG  +RRL GHSH V D V+SSDG +ALS SWD  LRLW+L+ G + RRFVGHT DVLSV+FS DNRQIVS SRDRTIKLWNTLG+CK+TI E   HTEWVSCVRFSPN   P IVS+ WD+ VKVW LS+CKL+    GHTGY+N V +SPDGSLC
Sbjct:    1 MAEQLILKGTLEGHNGWVTSLATSLENPNMLLSGSRDKSLIIWNLTRDETSYGYPKRRLHGHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKFTITE-KGHTEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLC 207          
The following BLAST results are available for this feature:
BLAST of FC920456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 338
Match NameE-valueIdentityDescription
GBLP_ORENI1.843e-8269.23Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_RAT3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_PIG3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MOUSE3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MACFA3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HUMAN3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_CHICK3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_BOVIN3.143e-8268.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_DROME8.560e-8069.38Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_NEUCR2.754e-7864.42Guanine nucleotide-binding protein subunit beta-li... [more]

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Properties
Property NameValue
Genbank descriptionC32008F05EF RVDevelop1 Citrus clementina cDNA clone C32008F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920456 ID=FC920456; Name=FC920456; organism=Citrus clementina; type=EST; length=699bp
GCTAGCTCGCCTCTACAAACCCTAACAGCAGGGGGGAAAAAAAAAAATAC
CGAAAGTACATTTGCTATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAG
GAACCATGCGCGCCCACACCGACATGGTAACGGCGATCGCCACCCCAATC
GACAACTCTGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGT
CTGGCACCTCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTT
TGACCGGCCACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGC
CAGTTCGCTCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTT
GGCCGAGGGCAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTC
TCTCCGTCGCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGT
GACCGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGAT
TCAAGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCC
CCAACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTC
AAAGTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCA
CACTGGATACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGT
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