FC920462
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_WHEAT (ATP-dependent Clp protease proteolytic subunit OS=Triticum aestivum GN=clpP PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_HORVU (ATP-dependent Clp protease proteolytic subunit OS=Hordeum vulgare GN=clpP PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSI (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. indica GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSA (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ORYNI (ATP-dependent Clp protease proteolytic subunit OS=Oryza nivara GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CYCTA (ATP-dependent Clp protease proteolytic subunit OS=Cycas taitungensis GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV +R PGE N LYRER++F GQ +D+E +NQ++ M+YL+ D++K +Y YIN PGG V P ++IYD MQ + V T C+G A R A+P +R+ + P
Sbjct: 1 MPIGVPKVPFRIPGEED-------NRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDENKDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPHARVMIHQP 121
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_AGRST (ATP-dependent Clp protease proteolytic subunit OS=Agrostis stolonifera GN=clpP PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_MAIZE (ATP-dependent Clp protease proteolytic subunit OS=Zea mays GN=clpP PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21 Identity = 52/128 (40.62%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN GG + +AI+DTMQ++ + T C+G A R A P +RI L P
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSLGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CUSRE (ATP-dependent Clp protease proteolytic subunit OS=Cuscuta reflexa GN=clpP PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.116e-20 Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 3
Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584
MPIG P+V ++ + S W+D++N LYRER +F+ ++ + +NQ++ +YL D++K ++++IN PGG + AIYDTMQ ++ + T CVG A R A P +R+ + P
Sbjct: 1 MPIGVPRVRFQYRRDRSRVWIDIYNRLYRERCLFLAHVVESQIANQLVGLFIYLGVQDETKDIFLFINSPGGGIISGFAIYDTMQFVRPDIQTICVGLAASMGSFLLVGGAITKRLAFPHARVMIHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |