FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIYDTMQ ++ V T C+G A R A+P +RI + P Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQP 123
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIYDTMQ ++ V T C+G A R A+P +RI + P Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQP 123
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SYNAS (ATP-dependent Clp protease proteolytic subunit OS=Syntrophus aciditrophicus (strain SB) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L ++R+IF+G ID+E +N I+A +L+L+S D K ++ Y+N PGG ++ +AIYDTM+ +K PV T CVG A RSA+P SRI + P Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGHISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQP 125
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 216 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 P V+ +T GE S+ D+++ L ++R+IFIG I+++ +N ++A ML+L+S D K +++YIN PGG V LAIYDTMQ ++S V T CVG A R +P SRI L P Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQP 125
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 201 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D K + +YIN PGG VT LAIYDTMQ +K PV T CVG A R A+P SRI + P Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQP 127
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CUSGR (ATP-dependent Clp protease proteolytic subunit OS=Cuscuta gronovii GN=clpP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG P+V + + W+D++N LYRER +F+ I+ + NQ+ +YL DD K ++ ++N PGG + LAIYD+MQ ++ T CVG A R A P +R+ + P Sbjct: 1 MPIGVPRVRFLYDEDTGQVWIDIYNRLYRERCLFLTHTINTKIGNQLAGLFIYLGIQDDPKDIFFFLNSPGGGIISGLAIYDSMQVVRPDTQTICVGLAASMACFLLVGGTITKRLAFPHARVMMHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_RHOBA (ATP-dependent Clp protease proteolytic subunit 2 OS=Rhodopirellula baltica GN=clpP2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L ++R+IF+GQ +D++ SN ++A ML+L + D K ++MYIN PGG +T +AIYDTMQ + V T+C+G A R A+P +RI + P Sbjct: 19 DIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDIHMYINSPGGSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFALPNARIMIHQP 125
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 216 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 P V+ +T G G + D+++ L ++R+IF+G +D++ +N I+A ML+L+S D K +++YIN PGG VT +AIYDTMQ ++ PV T CVG A R A+P +RI + P Sbjct: 5 PMVVEQT-GRGERAY-DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQP 125
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CHLPD (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium phaeobacteroides (strain DSM 266) GN=clpP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.233e-18 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 144 KSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 + LYSG ++ I G + M I T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+Y+N PGG V+ L IYDTMQ ++ V T CVG A R+++P SRI + P Sbjct: 13 RKLYSGAI-EQGITGSLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQP 150
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CHLTE (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium tepidum GN=clpP PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 144 KSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 K LYSG + I ++ M I T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YIN PGG V+ L IYDTMQ ++ + T CVG A R+++P SRI + P Sbjct: 13 KKLYSGAIENS-INSQLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGSPIDEHVAGLIIAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTSGKRASLPHSRIMIHQP 150 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |