FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 201 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+ P V+ +T GE S+ D+ + L ++R++ +G ID++ +N I+A +L+L+S D K + +YIN PGG VT LAIYDTMQ +K PV T CVG A R A+P SRI + P Sbjct: 4 MPV--PYVIEQTHRGERSY---DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQP 127
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.975e-18 Identity = 50/124 (40.32%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 216 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L+S D K +Y+YIN PGG VT LAIYDTMQ +K V T C+G A R A+P SRI + P Sbjct: 12 PIVIEQTPRGERAY---DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQP 132
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PELLD (ATP-dependent Clp protease proteolytic subunit OS=Pelodictyon luteolum (strain DSM 273) GN=clpP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 222 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 ++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+Y+N PGG V+ L IYDTMQ ++ V T CVG A R+++P SRI + P Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQP 150
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_DESPS (ATP-dependent Clp protease proteolytic subunit OS=Desulfotalea psychrophila GN=clpP PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 216 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 P V+ +TP GE S+ D+++ L +ER+IF+G ++++ +N I+A +L+L++ D K + YIN PGG VT +AIYDTMQ +K + T C+G A R A+P SRI + P Sbjct: 5 PMVVEQTPRGERSY---DIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQP 125
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CHLCH (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium chlorochromatii (strain CaD3) GN=clpP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 144 KSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 K LYSG ++ I + M I T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YIN PGG V+ L IYDTMQ ++ + T CVG A R+++P SRI + P Sbjct: 13 KKLYSGAI-EQGISNSLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQP 150
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18 Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 216 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 P V+ +T GE S+ D+W+ L ++R IFIG ID+ +N ++A ML+L++ D K +++YIN PGG +T +AIYDTMQ +K V T C+G A R ++P +RI + P Sbjct: 6 PIVIEQTSRGERSY---DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQP 126
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIYDTMQ +K V T CVG A R A+P +RI + P Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQP 134
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIYDTMQ +K V T CVG A R A+P +RI + P Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQP 134
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIYDTMQ +K V T CVG A R A+P +RI + P Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQP 134
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 246 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V L I+DTMQ +K + T CVG A RS++ SRI + P Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQP 123 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |