FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D+SK +Y+YIN PGG VT LAIYDT++ +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27 Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR G +WVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ D SK +Y+YIN PGG VT + ++D M +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKSKGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CALFG (ATP-dependent Clp protease proteolytic subunit OS=Calycanthus floridus var. glaucus GN=clpP PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_BUXMI (ATP-dependent Clp protease proteolytic subunit OS=Buxus microphylla GN=clpP PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ + + T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=clpP PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE W+D++N LYRER++F+GQ ++ E SNQ++ M+YL D++K +Y +IN PGG V P +AIYDTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDENKDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SOLLC (ATP-dependent Clp protease proteolytic subunit OS=Solanum lycopersicum GN=clpP PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG P+V++R PG+ WVD++N LYRER++F+GQ I E SNQ++ MLYL D++K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A R A P +R+ + P Sbjct: 1 MPIGVPRVVFRNPGDPISSWVDIYNRLYRERLLFLGQGIGTELSNQLIGLMLYLSMEDENKDLYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICLGLAASMGSFILAGGQLTKRIAFPHARVMIHEP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PANGI (ATP-dependent Clp protease proteolytic subunit OS=Panax ginseng GN=clpP PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+K +Y+++N PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDTKDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_OSTTA (ATP-dependent Clp protease proteolytic subunit OS=Ostreococcus tauri GN=clpP PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR PGE + QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D S+ +++YIN PGG VT L+++D M +++ V T +GFA +R A+P R+ + P Sbjct: 1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDASRSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPHCRVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PLAOC (ATP-dependent Clp protease proteolytic subunit OS=Platanus occidentalis GN=clpP PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P +AIYDTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |