FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PINTH (ATP-dependent Clp protease proteolytic subunit OS=Pinus thunbergii GN=clpP PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.557e-24 Identity = 51/128 (39.84%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + ++D MQ++ V T C+G A R A+P +RI + P Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSNKDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPHARIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PHAVU (ATP-dependent Clp protease proteolytic subunit OS=Phaseolus vulgaris GN=clpP PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.068e-24 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 497 MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL ++K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDILINRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKENKDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLA 100
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_RANMC (ATP-dependent Clp protease proteolytic subunit OS=Ranunculus macranthus GN=clpP PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24 Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D+++ ++++IN PGG V P +AIYDTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYR-LHRERLLFLGQGVDSEISNQLIGLMVYLSLEDETRDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPHARVMIHQP 127
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PINCO (ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta GN=clpP PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24 Identity = 50/128 (39.06%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + +Y MQ++ V T C+G A R A+P +R+ + P Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PINKO (ATP-dependent Clp protease proteolytic subunit OS=Pinus koraiensis GN=clpP PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.766e-23 Identity = 50/128 (39.06%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + ++D MQ + V T C+G A R A+P +R+ + P Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANKDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_LEPTE (ATP-dependent Clp protease proteolytic subunit OS=Leptosira terrestris GN=clpP PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.933e-23 Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV Y P E W+DL++ LY+ER+I I ++++E NQI++ ++YL + DDSK ++YIN PGG VT +AIYD M+ +PV T VG + R A P SRI + P Sbjct: 1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDSKEFFIYINSPGGSVTSGIAIYDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_BIGNA (ATP-dependent Clp protease proteolytic subunit OS=Bigelowiella natans GN=clpP PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKVL++ + + QWVD++ LY++R+IF+ Q +D++FSNQI++ +L+LDS + +Y YIN GG V ++IYDTM + S + T C+G A R +P SR+ L P Sbjct: 1 MPIGIPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKEELIYFYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPHSRVLLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SORBI (ATP-dependent Clp protease proteolytic subunit OS=Sorghum bicolor GN=clpP PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SACOF (ATP-dependent Clp protease proteolytic subunit OS=Saccharum officinarum GN=clpP PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SACHY (ATP-dependent Clp protease proteolytic subunit OS=Saccharum hybrid GN=clpP PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A R A P +RI L P Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |