FC920481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 59/220 (26.82%), Postives = 107/220 (48.64%), Query Frame = 2 Query: 8 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT 640 F N + VTG G +GS+LV +L+E N +V ++ S NL + + ++R + + +IE +D ++HLA A NP+ T + N++GT N+L ++ + R+++ S+ + YGD P DE+ P+ + YD K A+ + Y +G+ + I R N YG +++ R++ I + GE +++ GT Sbjct: 3 FWKNKNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQS--NLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENM-----PLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGG-DLNFNRIIPQTIQLVLNGEAPEIRSDGT 214
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_ERWT9 (Bifunctional polymyxin resistance protein arnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+ ++ EV +D GS D + ++IGH RF + D++ E + + D + L A+PI Y NP++ + + L ++ + RI+ STSEVYG DE V PI R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLVDDNFEVFGLD---IGS-DAIGRFIGHERFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPSTSEVYGMCTDASFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 2 Query: 11 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA----------KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQL 646 + ILVTGGAGFIGS +V +++N ++ V+ +D + G+ ++L +PR+ + D+ + ++ D + HLA + + + I+TN++GT ++L A KR R ST EVYGD +H D+ + P S Y K A+ L+ + R + + ++ N YGPR + +++ I A+ G+PL V G Q+ Sbjct: 4 EGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGD--LHGTDDLF-TETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQI 228
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_SHESH (Bifunctional polymyxin resistance protein arnA OS=Shewanella sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 56/225 (24.89%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPI------GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 ++L+ G GFIG+HL +L+++ K E+ +D S + + + HP F + D+T E + + D + L A+PI Y NP++ + + L ++ + RI+ STSEVYG DE + + +P+ R Y K++ + +++ Y ++ ++ + R FN GPR++ + R ++ I + G P+ + G Q Sbjct: 319 KVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDITIHNEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPSTSEVYG----MCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLFRPFNWMGPRLDSLNSARVGSSRAITQLILNLVEGTPIKLIDGGEQ 535
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_SALTI (Bifunctional polymyxin resistance protein arnA OS=Salmonella typhi GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 61/222 (27.48%), Postives = 108/222 (48.65%), Query Frame = 2 Query: 20 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 +R+L+ G GFIG+HL ++L++ E EV +D GS + + +++ HPRF + D++ E + + D + L A+PI Y NP++ + + L ++ + R++ STSEVYG DE V P+ R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_SALPK (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 61/222 (27.48%), Postives = 108/222 (48.65%), Query Frame = 2 Query: 20 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 +R+L+ G GFIG+HL ++L++ E EV +D GS + + +++ HPRF + D++ E + + D + L A+PI Y NP++ + + L ++ + R++ STSEVYG DE V P+ R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_SALPA (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 61/222 (27.48%), Postives = 108/222 (48.65%), Query Frame = 2 Query: 20 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 +R+L+ G GFIG+HL ++L++ E EV +D GS + + +++ HPRF + D++ E + + D + L A+PI Y NP++ + + L ++ + R++ STSEVYG DE V P+ R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_PHOLL (Bifunctional polymyxin resistance protein arnA OS=Photorhabdus luminescens subsp. laumondii GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 62/222 (27.93%), Postives = 108/222 (48.65%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+ + ++ +D GS + ++I +PRF I D+ E + + D + L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D+S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLRDGNYDIYGMD---IGSSA-IERFISNPRFHFIEGDINIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPSTSEVYGMCDDKEFDEDDSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLKFTLFRPFNWMGPRLDNLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: ARNA_ECOL5 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 61/221 (27.60%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 23 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++ E + + D + L A+PI Y NP++ + + L ++ + RI+ STSEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q Sbjct: 317 RVLILGVNGFIGNHLTERLLCEDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
BLAST of FC920481 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 70/219 (31.96%), Postives = 101/219 (46.12%), Query Frame = 2 Query: 20 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-----FTGSKDNLRKWIGHPRFELIRHDV----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 643 M+ILVTG AGFIGSHL ++L++++K+ VI +D++ F+ NL+ + RF I+ ++ LL VD I+HLA N + I L L A R + + STS VYG+ + + ++P GV K E L Y + GI I I R F YGPR D I Q ++ +PLT+ G Q Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQ 211 The following BLAST results are available for this feature:
BLAST of FC920481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920481 ID=FC920481; Name=FC920481; organism=Citrus clementina; type=EST; length=693bpback to top |