FC920499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_GRATL (Photosystem I reaction center subunit III OS=Gracilaria tenuistipitata var. liui GN=psaF PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 308 AVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 A + +GLT C+ES F KR +KKLE+ Y ++ PA+A++ + KTK RF+ Y K G+LCG+DGLPHLI G H GEF+ PG+LFLYI GWIGWVGR YL IS KP Sbjct: 24 AEVETAGLTKCQESPAFTKRLNNSVKKLETRLAKYDANTPPAIALQTQIIKTKIRFNKYAKSGILCGTDGLPHLITDGRWNHAGEFMIPGVLFLYITGWIGWVGRGYLRDISQTTKP 140
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_CYACA (Photosystem I reaction center subunit III OS=Cyanidium caldarium GN=psaF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27 Identity = 57/103 (55.34%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 323 SGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYL 631 S LTPC+ S QF R +KKLE+ Y +S +IK +EKTK RFD Y K LLCG DGLPHLI GD +H GEF P +LF+YIAGWIGW G+ YL Sbjct: 29 STLTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKTKIRFDKYAKSSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIAGWIGWAGKGYL 131
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_SYNP6 (Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 57/115 (49.57%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 308 AVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEK 652 A AD++GLTPC ES +F +R A A + K RF+NY + LCG+DGLPHLIV G H G+FI P LLFLYIAGWIGWVGRSYL AI +K Sbjct: 21 ASADVAGLTPCSESPRFIQR-----------------------AEAAATPQAKARFENYSQ--ALCGADGLPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDK 110
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_THEEB (Photosystem I reaction center subunit III OS=Thermosynechococcus elongatus (strain BP-1) GN=psaF PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 308 AVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAI--SGE 649 A AD++GL PCK+S F KR +A A+ A ++RF+ Y + LCG DGLPHL+V G G+F+ P +LFLYIAGWIGWVGR+YLIA+ SGE Sbjct: 21 ASADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGE 116
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_SYNEN (Photosystem I reaction center subunit III OS=Synechococcus elongatus naegeli GN=psaF PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 308 AVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAI--SGE 649 A AD++GL PCK+S F KR +A A+ A ++RF+ Y + LCG DGLPHL+V G G+F+ P +LFLYIAGWIGWVGR+YLIA+ SGE Sbjct: 21 ASADVAGLVPCKDSPAFQKR------------------AAAAVNTTADPASGQKRFERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGE 116
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_SYNY3 (Photosystem I reaction center subunit III OS=Synechocystis sp. (strain PCC 6803) GN=psaF PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 49/120 (40.83%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P + D + LTPC E+ + + K L P+S K R + Y LCG +G PHLIV G H G+F+ P +LFLYIAGWIGWVGRSYLI I K P Sbjct: 19 PSASADDFANLTPCSENPAYLAKSKNFLNTTND------PNSG------------KIRAERYAS--ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNP 118
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_MASLA (Photosystem I reaction center subunit III OS=Mastigocladus laminosus GN=psaF PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 305 PAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAI 640 PA A + L PC ES F +R Q + + P E K+RF+ Y + LCG +GLPHLIV G H G+F+ P +LFLYIAGWIGWVGR+YL I Sbjct: 20 PAQALGADLVPCSESPAFQQRA-QVARNTTADP-----------------ESGKKRFERYSQ--ALCGPEGLPHLIVDGRLDHAGDFLIPSILFLYIAGWIGWVGRAYLQTI 111
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_ANAVT (Photosystem I reaction center subunit III OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaF PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 46/112 (41.07%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 305 PAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAI 640 PA A + LTPC E+ F K A A + ++RF+ Y + LCG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL AI Sbjct: 20 PAKALGADLTPCAENPAFQALAKN------------------ARNTTADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAI 111
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_ANASP (Photosystem I reaction center subunit III OS=Anabaena sp. (strain PCC 7120) GN=psaF PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 46/112 (41.07%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 305 PAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAI 640 PA A + LTPC E+ F K A A + ++RF+ Y + LCG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL AI Sbjct: 20 PAKALGADLTPCAENPAFQALAKN------------------ARNTTADPQSGQKRFERYSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAI 111
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_GLOVI (Photosystem I reaction center subunit III OS=Gloeobacter violaceus GN=psaF PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 335 PCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISG 646 P K K ++ + ++LE++ K A D P +A TK++F+ Y CG DG PHLI SG G+F+ P +LFL+IAG +GW GR YL G Sbjct: 37 PLKLCKDVPAYQELKTQRLEAAQKAQA-DGKPVTFNEAG---TKQKFERYDT--AYCGQDGYPHLITSGQLDRAGDFLIPSVLFLWIAGALGWAGRLYLAESKG 134 The following BLAST results are available for this feature:
BLAST of FC920499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920499 ID=FC920499; Name=FC920499; organism=Citrus clementina; type=EST; length=705bpback to top |