FC920515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 62/163 (38.04%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 189 LQKRGQCCYMLAYECYKPCD--ETRRLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 + R + Y++ Y CY P + + + ++++ + LE FQ K + SG+GEETY P + P++ A E ++++F LDKLF T I+P +I VLVVN SLF+P PSL++ I+N+Y LR ++K+FNL GMGCSA V+++DL + + + Sbjct: 101 IMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLE---FQRKILERSGLGEETYLPE-ALHCIPPRPTMMAAREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVISIDLAKDMLQ 259
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 63/157 (40.13%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 213 YMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEE---YRFQLKNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 665 Y++ + CY P D + AR + ++ G + FQ K + SG+GE+TY P E P S+A A E ++++F LD LFA T++ P +I +LVVN SLF+P PSL++ I+N+Y LR +I+++NL GMGCSA V+AVDL + + Sbjct: 113 YLVDFSCYLPPDHLKA----PYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVP----EAMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDM 261
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24 Identity = 55/158 (34.81%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 213 YMLAYECYKPCDETRRLDTESCARVVW--RNKKLGL---EEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 ++L + CYKP C R + R++++G+ + FQ K + SG+G++TY P ++ +P ++EA E + ++F +D + +T ++P +I +LVVN SLF+P PSL++ I+N+Y LR ++ ++NL GMGCSA ++++DL +QL + Sbjct: 106 FLLDFACYKPDSSL------ICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRV-PPNPCMSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 55/158 (34.81%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 213 YMLAYECYKPCDETRRLDTESCARVVW--RNKKLGL---EEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 ++L + CYKP C R + R++++G+ + FQ K + SG+G++TY P ++ +P + EA E + ++F +D + +T + P +I +LVVN SLF+P PSL++ I+N+Y LR +I ++NL GMGCSA ++++DL +Q+ + Sbjct: 112 FLLDFSCYKPDPSL------ICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRV-PPNPCMEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQ 262
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 183 WVLQK--RGQCCYMLAYECYKPCDETR----------RLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 W+L R + Y++ + CY P + R E A + W+NK+ FQ K + SG+G+ETY P EG + P + + E +E+IF LD LF T + P +I +LVVN S F+P PSL S I+N+Y LR++IK+ NL GMGCSA V+AVD+ + L + Sbjct: 58 WILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRARE--AGMCWKNKESD-HLVDFQEKILERSGLGQETYIP----EGLQCFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLRDNIKSLNLGGMGCSAGVIAVDVAKGLLQ 228
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 213 YMLAYECYKPCD--------------ETRRLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTTK 680 Y++ Y CY P + R+ DT S R V + L+ F K SG+G+ETY P ++ + A + E +++I L+ LF T ++P EI +LVVN S+F+P PSL++ ++N + LR++IK+FNL GMGCSA V+A+DL + L K Sbjct: 78 YLVDYSCYLPPPHLKVSVSKVMDIFYQIRKADTSS--RNVACDDPSSLD---FLRKIQERSGLGDETYSPEGLIHVPPRK-TFAASREETEKVIIGALENLFENTKVNPREIGILVVNSSMFNPTPSLSAMVVNTFKLRSNIKSFNLGGMGCSAGVIAIDLAKDLLHVHK 241
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 189 LQKRGQCCYMLAYECYKPCDETRRLDTESCARV-------VWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 L R + Y++ + CY P + V W+ + L + F K + SG+G+ETY P EG + P +LA + E +E+I +D LF T ISPS+I +LVVN S F+P PSL+S ++N++ LR++IK+ NL GMGCSA V+A+D + L + Sbjct: 72 LMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMD--FCEKILERSGLGQETYVP----EGLQTLPLQQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 236
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 213 YMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 Y++ + CY+P D R + + + E Q K + SGI ++ P V E + S++ A E EI+F + LF++ +I P ID+LV N SLF P+PS+TS IIN++ +R+DIK+F+LSGMGCSA +++V+LV+ L + Sbjct: 48 YLIDFSCYQPPDFLRA-PVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVHE-IPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINKFGMRSDIKSFSLSGMGCSAGILSVNLVKDLMK 198
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 53/159 (33.33%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 213 YMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTTKTAL 689 Y+L + CY+ D + R+ + ++ + KL E FQ + + S + +T PR+++E + SL+ E IF +++ L + +SP ID+L+ N SL SP+PSL++ +IN++++R++IK+FNLSGMGC+A +++V+L L + + +L Sbjct: 52 YLLDFTCYRAPD-SNRVPMSTLIETIYLDDKLDQESIDFQARILERSWLSNQTSIPRSLMEIPLKK-SLSSVKIETMTTIFTSVEDLLRKNKLSPRSIDILITNCSLHSPSPSLSAMVINKFHMRSNIKSFNLSGMGCAAGILSVNLANDLLQAHRGSL 208
BLAST of FC920515 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 54/158 (34.18%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 198 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFQLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 671 R + Y++ + C++P D + + +E+ + + E +F + + SG+G++TY PR ++ +PS+ EA E + +IF L+ LF +T I P E+ + +VN SLF+P PSL+S I+NRY L+ D+K +NLSG ++VDL L + Sbjct: 56 RSKPVYLVDFSCHQPTDSCK-ISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTS-PPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG-------ISVDLATNLLK 204 The following BLAST results are available for this feature:
BLAST of FC920515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920515 ID=FC920515; Name=FC920515; organism=Citrus clementina; type=EST; length=720bpback to top |