FC920519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.200e-69 Identity = 134/224 (59.82%), Postives = 165/224 (73.66%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + M E E LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL KD TTI+ Q + RVAQIR +E DY++EKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 AEAMDKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDYDKEKLQERLAKLAGGVAVIKVGAATE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.874e-69 Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG++ +N L VVEGMQFDRGY+SPYF+ + E VE +N +LLVDKKI+N R+L+ LE + P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V Q+A+ R AQI+ IE + DY++EKL ER+AKLSGGVAVI+VGA TE Sbjct: 163 AQAMEKVGKEGVITVEEGQALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.874e-69 Identity = 131/223 (58.74%), Postives = 169/223 (75.78%), Query Frame = 2 Query: 11 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 679 AM KV + GV+T+EE KS L VVEGMQ DRGY+SPYFVTD E++ V++EN ++L+ DKKI++ +DL+ VLE R +LIIAEDIE EALATLVVNK RG L +AA+KAPGFG+R+ L DIAILTGG +I +EVGL+L+ V +++G K+ + KD TTIV DG T + V KR+AQIR + ++ DY++EKL ERIAKL+GGVAVI+VGA TET Sbjct: 163 AMDKVTKDGVITVEESKSLSTDLEVVEGMQIDRGYLSPYFVTDQERLVVDFENARILITDKKISSIQDLVPVLEKVARAGQSLLIIAEDIEGEALATLVVNKARGVLNVAAVKAPGFGDRRKAMLQDIAILTGGQLISEEVGLSLEMVDLDMMGIGRKISINKDNTTIVADGGTAEEVKKRIAQIRKQLGESDSDYDKEKLQERIAKLAGGVAVIKVGAATET 385
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_PROMH (60 kDa chaperonin OS=Proteus mirabilis (strain HI4320) GN=groL PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.753e-69 Identity = 135/224 (60.27%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG E+ L VVEGMQFDRGY+SPYF+ E E EN +LLVDKK++N R+L+ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILT GTVI +E+G+ L+K E LG A +VV+ KDTTTI+ Q+A+S RVAQIR IE+A DY+REKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 AQAMEKVGKEGVITVEEGTGLEDELDVVEGMQFDRGYLSPYFINKPETGTAELENPFILLVDKKVSNIRELLPVLEGVAKANKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTNGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGLGEQEAISGRVAQIRQQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ALCBS (60 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groL PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.753e-69 Identity = 135/224 (60.27%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG+S +N L VVEGMQFDRGY+SPYF+ + EKM VE E+ +LLVDKKI+N R+L+ LE+ + P+LIIAEDIE EALATLVVN +RG +K AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LG A KV + K+ TTIV Q + RV QIR IEN+ DY++EKL ER+AKL+GGVAVI++GA TE Sbjct: 162 AQAMEKVGQEGVITVEEGQSLQNELDVVEGMQFDRGYLSPYFINNQEKMQVELEDPYILLVDKKISNIRELLPALENVAKAGKPLLIIAEDIEGEALATLVVNNMRGIIKCAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLENASLEDLGTAKKVNIDKENTTIVDGAGQQADIDGRVEQIRKEIENSSSDYDKEKLQERVAKLAGGVAVIKIGAATE 385
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_CAMC5 (60 kDa chaperonin OS=Campylobacter curvus (strain 525.92) GN=groL PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 4.902e-69 Identity = 136/225 (60.44%), Postives = 167/225 (74.22%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 679 A AM KVG+ GV+T+EE KS E+ L VVEGMQFDRGY+SPYF+T++EKM VE N +LL DKKITN +DL+ VLE + P+LI+AEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ E LG AS VV+ KD TTIV + A+ R+ QI+ I DY++EKL ER+AKLSGGVAVI+VGA TET Sbjct: 162 ADAMEKVGKDGVITVEEAKSIEDELNVVEGMQFDRGYLSPYFITNAEKMQVELSNPFILLFDKKITNLKDLLPVLEQIQKTGKPLLIVAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESATLEDLGQASSVVIDKDNTTIVNGAGEKSAIDARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATET 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_SHEAM (60 kDa chaperonin OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=groL PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.402e-69 Identity = 132/224 (58.93%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E AVE +N +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ ++ + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 ATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGAVELDNPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDYDREKLQERMAKLAGGVAVIKVGAATE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.402e-69 Identity = 128/224 (57.14%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG +N L VVEGMQFDRGY+SPYF+TD + MA + ++ +L+ DKKI+N RDL+ VLE + P+L+I+ED+E EALATLVVN +RG +K+ A+KAPGFG+R+ L+DIA+LTGGTVI +EVGL+LDKV + LG A K+ + K+ TTIV + D + RV Q+R IE A DY++EKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 AEAMDKVGKEGVITVEEGSGLDNELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESVAKAGKPLLVISEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDIAVLTGGTVISEEVGLSLDKVTLDDLGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_PSEU5 (60 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groL PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.361e-69 Identity = 133/224 (59.38%), Postives = 167/224 (74.55%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM +VG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + M E +N LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL K+ TTI+ Q + RVAQIR IE+ DY++EKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 AEAMERVGKEGVITVEEGSGFENELSVVEGMQFDRGYLSPYFINKPDTMVAELDNPLLLLVDKKISNIRELLPVLEGVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTE 386
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.092e-68 Identity = 130/224 (58.04%), Postives = 171/224 (76.34%), Query Frame = 2 Query: 5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676 A AM KVG+ GV+T+EEG+S +N L VVEGMQFDRGY+SPYF+ + E VE ++ +LLVDKK++N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+A LTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V ++A+ RVAQIR IE + DY++EKL ER+AKL+GGVAVI+VGA TE Sbjct: 163 AEAMDKVGKEGVITVEEGQSLQNELEVVEGMQFDRGYLSPYFMNNQENGTVELDSPFILLVDKKVSNIRELLPTLEAVAKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDLATLTGGTVISEEIGLELEKVTLEDLGTAKRVVINKDNTTVVDGAGEEEAIQGRVAQIRAQIEESSSDYDKEKLQERLAKLAGGVAVIKVGAATE 386 The following BLAST results are available for this feature:
BLAST of FC920519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920519 ID=FC920519; Name=FC920519; organism=Citrus clementina; type=EST; length=679bpback to top |