FC920519

Overview
NameFC920519
Unique NameFC920519
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH602_BURCA (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL2 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.517e-65
Identity = 127/224 (56.70%), Postives = 162/224 (72.32%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+E+GKS EN L VVEGMQFDRGY+SPYF+ D  K A   ++  +LL DKKI++ RDL+ +LE A +   P+LI+AED+E EALATLVVN +RG LK+AA+KAPGFG+R+   L+D+AILTG TVI +E G  LDK   E LG+A +V + KD T I+        +  RV  IR  I+ A  DY+REKL ER+AKL+GGVAVI+VGA TE
Sbjct:  163 ADAMEKVGKDGVITVEDGKSLENELDVVEGMQFDRGYVSPYFINDPAKQAAYLDDALILLHDKKISSVRDLLPILEAASKAGKPLLIVAEDVEAEALATLVVNSMRGILKVAAVKAPGFGDRRKAMLEDLAILTGATVISEETGKQLDKATLEDLGSAKRVEVRKDDTIIIDGAGDAARIEARVKSIRVQIDEATSDYDREKLQERVAKLAGGVAVIKVGAVTE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_POLSQ (60 kDa chaperonin OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 127/224 (56.70%), Postives = 160/224 (71.43%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+E+GKS E+ L VVEGMQFDRGY+SPYF+   EK     E+  +LL DKKI N RDL+ VLE   +   P+LIIAED+E EALATLVVN +RG +K  A+KAPGFG+R+   L+DIAILTGGTVI +E+GL L+K   E LG A ++ + K+ T I+       A+  RV  IR  IE A  DY++EKL ER+AKL+GGVAVI+VGA TE
Sbjct:  163 AEAMEKVGKEGVITVEDGKSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESPYVLLFDKKIANIRDLLPVLEQVAKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTVIAEEIGLTLEKATLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDYDKEKLQERVAKLAGGVAVIRVGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 124/224 (55.36%), Postives = 170/224 (75.89%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AMS+VG  GV+T+EE KS +  L VVEGMQFDRGY+SPYF+T+++KM VE +   +LL +KK+T+ + ++ VLE  ++   P+LIIAEDIE EALATLVVNKLRG LK+AA+KAPGFG+R+   L+D+A+L+GG VI +++G+ L+ V  ++LG A +V +TKD TTIV     +  +  RVAQI+  IE+   DY++EKL ER+AKL+GGVAVI+VG  TE
Sbjct:  162 AQAMSRVGNEGVITVEEAKSLDTELDVVEGMQFDRGYLSPYFITNADKMVVELDEPLILLHEKKLTSLQPMLPVLEAVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDLAVLSGGQVISEDLGIKLESVTLDMLGKAKRVSITKDDTTIVDGAGKKKDIEARVAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGGATE 385
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_MAGSA (60 kDa chaperonin OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 125/224 (55.80%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG  GV+T+EE K  +  L VVEGMQFDRGY SPYFVT++EKM VE +N  +LL +KK++  + L+ VLE  ++   P++IIAEDIE EALATLVVNKLRG LK+AA+KAPGFG+R+   L+DIAILTGG VI +++G+ L+ V  E+LG + ++ +TK+ TTIV     + A+  R  QIR  +E    DY+REKL ER+AKL+GGVAVI+VG  +E
Sbjct:  163 AKAMEKVGNEGVITVEEAKGLDTELDVVEGMQFDRGYTSPYFVTNAEKMTVELDNPYILLHEKKLSGLQPLLPVLEQVVQSGRPLVIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLESVNLEMLGTSKRITITKEDTTIVDGSGDKGAIDARCKQIRAQVEETTSDYDREKLQERLAKLAGGVAVIKVGGGSE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIBY (60 kDa chaperonin OS=Acinetobacter baumannii (strain AYE) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIBT (60 kDa chaperonin OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=groL PE=3 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIBS (60 kDa chaperonin OS=Acinetobacter baumannii (strain SDF) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIBC (60 kDa chaperonin OS=Acinetobacter baumannii (strain ACICU) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIB5 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB0057) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
[Close]
BLAST of FC920519 vs. ExPASy Swiss-Prot
Match: CH60_ACIB3 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB307-0294) GN=groL PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65
Identity = 126/224 (56.25%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:    5 AGAMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTE 676
            A AM KVG+ GV+T+EEG   E+ L VVEGMQFDRGYISPYF    + +  E EN  +LLVDKKI+N R+LI+VLE   +   P+LIIAED+E EALATLVVN +RG +K+ A+KAPGFG+R+   L DIAILTG TVI +EVG++L++   + LG A K+ ++K+ T IV       A+++RV QIR  IE +  +Y+REKL ER+AKL+GGVAVI++GA TE
Sbjct:  163 AQAMEKVGKEGVITVEEGSGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAVAKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATE 386
The following BLAST results are available for this feature:
BLAST of FC920519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_BURCA2.517e-6556.7060 kDa chaperonin 2 OS=Burkholderia cenocepacia (s... [more]
CH60_POLSQ3.288e-6556.7060 kDa chaperonin OS=Polynucleobacter sp. (strain ... [more]
CH60_PARL13.288e-6555.3660 kDa chaperonin OS=Parvibaculum lavamentivorans ... [more]
CH60_MAGSA3.288e-6555.8060 kDa chaperonin OS=Magnetospirillum magneticum (... [more]
CH60_ACIBY3.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBT3.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBS3.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBC3.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIB53.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIB33.288e-6556.2560 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32009E02EF RVDevelop1 Citrus clementina cDNA clone C32009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920519 ID=FC920519; Name=FC920519; organism=Citrus clementina; type=EST; length=679bp
CTCTGCCGGGGCCATGAGTAAAGTGGGACGTACGGGTGTGGTGACCCTTG
AAGAGGGAAAAAGTGCTGAGAATATGCTCTATGTTGTTGAGGGAATGCAA
TTTGATCGTGGTTATATTTCTCCCTACTTCGTCACTGATAGTGAGAAAAT
GGCAGTTGAATATGAGAACTGCAAGTTGCTTCTTGTGGATAAAAAGATTA
CCAATGCAAGGGACCTTATCAACGTTTTGGAAGATGCGATTAGAGGTGCA
TACCCAATTTTGATTATTGCAGAAGATATTGAGCAAGAAGCACTGGCAAC
TCTTGTCGTGAACAAGCTGAGAGGTGCATTGAAGATTGCTGCTCTTAAAG
CTCCTGGTTTTGGAGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATT
TTGACTGGAGGAACTGTAATCAGAGATGAGGTGGGACTTGCCTTGGACAA
AGTTGGCAAGGAGGTCCTAGGTAATGCTTCTAAAGTTGTGCTCACAAAGG
ATACCACCACCATTGTGGGGGATGGCAGCACCCAGGATGCAGTGAGCAAA
CGAGTGGCGCAAATCAGAACTCTAATTGAGAACGCTGAGCAAGACTATGA
AAGGGAGAAGCTTAATGAAAGAATTGCTAAACTGTCAGGTGGTGTTGCTG
TCATACAGGTTGGAGCTCAAACTGAGACA
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