FC920520

Overview
NameFC920520
Unique NameFC920520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 2
Query:  470 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYPTKA 748
            A+P S+DWR  GAV EVK+QG CG CWAF+ IA VEGI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T++ YP +A
Sbjct:    1 AVPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRA 91          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.160e-24
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 2
Query:  182 RTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKR--SNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            R  +++   ++ ++   GK Y+   E   R  IF+ N    +  N +      +Y   LN  ADLT+EE+   + G R    +T L+ KR  S  Y     E LPD VDWR KGAV  V++QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YP
Sbjct:   82 RAMEKLETEWKDYVTALGKHYDQK-ENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFMVRN-GLRL-PNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYP 270          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 2
Query:  473 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKIYPTKA 748
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I +NGG+D+E+ YP +A
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEA 93          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24
Identity = 69/185 (37.30%), Postives = 105/185 (56.76%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMHLGARFGAKRTSLKSKRS---NRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            F  W  K+ K + A+ EK +R  IF  N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+   N  +  +    P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +V C   + N GCNGGL    +++II++ G+  E  YP
Sbjct:   16 FNTWASKNNKHFTAI-EKLRRRAIFNMNAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYP 185          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 70/182 (38.46%), Postives = 101/182 (55.49%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            F  W+  + K + A+ E  +R  IF  N R + E+N +  T+K+ ++  FA +TNEEY S+    R G ++  +      RYL       P +VDWRKKG V  ++DQG+CGSC+ F +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++N GI  E  YP
Sbjct:   16 FNTWVANNNKHFTAV-ESLRRRAIFNMNARIVAENNRKE-TFKLSVDGPFAAMTNEEYNSLLKLKRSGEEKGEV------RYL---NIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYP 185          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.873e-23
Identity = 69/185 (37.30%), Postives = 102/185 (55.14%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMHLGARFGAKRTSLKSKRS---NRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            F  W   + K + A+ E  +R  IF  N RF+ E N +  ++K+ ++  FA +TNEEYR++            LKSKR+   N  +  +    P+SVDWR +G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ LV C   + N GCNGGL    +++II N G+  E  YP
Sbjct:    9 FNTWAANNNKHFTAV-EALRRRAIFNMNARFVAEFNKKG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTVEENGKVTYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQN-GVAKESDYP 178          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMHLGARFGAKRTSLKSKRS---NRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            F  W  K+ K + A+ EK +R  IF  N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+   N  +  +    P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +     + N GCNGGL    +++II++ G+  E  YP
Sbjct:   12 FNTWASKNNKHFTAI-EKLRRRAIFNMNAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYP 180          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 60/183 (32.79%), Postives = 107/183 (58.47%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSM---------HLGARFGAKRTSLKSKRSNRYLPRVGEA-----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGI-NKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG 712
            F  ++ K+ ++Y  + E+ ++++ FK N   I +HN  N+ YK+ +N+F+D + +++ S          HL  ++    +S+ + +    +     A     +P+ +D+R+KG V E KDQG CGSCWAF+++  VE +  K    ++++LSEQE+VDC +  N GC+GG   Y+F + I+NG
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIYAIENG 418          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22
Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHN--SENRTYKVGLNRFADLTNEEYRSM---------------------HLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 709
            F  ++ +H K Y  + E+ ++FEIFK N   I  HN  ++N  YK  +N+F+D + EE +                       HL             KR+ +    +   +P+ +D+R+KG V E KDQG CGSCWAF+++  +E +      +++S SEQE+VDC    N GC+GG   Y+F +++ N
Sbjct:  225 FFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEK---DIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD-NFGCDGGHPFYSFLYVLQN 410          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21
Identity = 62/202 (30.69%), Postives = 111/202 (54.95%), Query Frame = 2
Query:  170 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLK--------SKRSNRYLPRVGEA------------LPDSVDWRKKGAVAEVKDQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG 712
            +S   ++ +++  F+A++ K+ K + +  ++ +RF  F++N   +  H      Y + LN+F+DL++EE+++++         TSL         S ++  Y+ ++ +A              ++++W +  AV+ +KDQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+I   G
Sbjct:  107 TSDAESELDMLIEFDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKP-TEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEYIHSKG 306          
The following BLAST results are available for this feature:
BLAST of FC920520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
MDO1_PSEMR8.881e-2556.99Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATL_BRUPA1.160e-2438.86Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL1_SHEEP1.515e-2459.14Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CPP2_ENTHI7.518e-2437.30Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CPP1_ENTHI2.187e-2338.46Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP3_ENTHI4.873e-2337.30Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
ACP2_ENTHI1.086e-2236.41Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP_PLAVS1.418e-2232.79Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CYSP_PLAFA9.190e-2232.11Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_THEAN4.561e-2130.69Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]

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Properties
Property NameValue
Genbank descriptionC32009E03EF RVDevelop1 Citrus clementina cDNA clone C32009E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920520 ID=FC920520; Name=FC920520; organism=Citrus clementina; type=EST; length=752bp
CCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAGTTCTTTT
CTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAGAAGATTTACCCTACAAAAGCATG
AT
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