FC920529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_ECOLI (NADP-specific glutamate dehydrogenase OS=Escherichia coli (strain K12) GN=gdhA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.034e-22 Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 3 Query: 192 SKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATELYL 719 S LER L+ P R I+ D + +RVQ A GP KGG+R+HP V+ + L T+K A+ +P GG KGG PK S E+ R + +++ +G TD+PA D+G + + ++ K ++ V TGK + GGSL R ATG G+VY TE L Sbjct: 49 SLLER-LVEPERVIQFRVVWVDDRNQIQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAML 223
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_UNKP (NADP-specific glutamate dehydrogenase OS=Unknown prokaryotic organism GN=gdhA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 198 LERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATELYL 719 LER L+ P R I+ + D G + FRVQ + A GP KGG+R+HP V+ + L T+K A+ +P GG KGG PK S + R + +++ +G TD+PA D+G + + ++ K ++ V TGK + GGSL R ATG G+VY T+ L Sbjct: 51 LER-LVEPERIIQFRVSWVDDRGQVQVNRAFRVQFNSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSQGRIMRFCQALMTELYRHLGPDTDVPAGDIGDGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTDAML 223
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE2_PORGI (NAD-specific glutamate dehydrogenase OS=Porphyromonas gingivalis GN=gdh PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 258 DDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 D G + +G+RVQ ++A GP KGGIR+HP V+ + L +K A+ +P GG KGG SPK S +E+ R + F ++ IG TDIPA D+G + + ++ Y K +TGK + GGS R +TG G VY Sbjct: 66 DQGKVQVNIGYRVQFNNAIGPYKGGIRFHPSVNLSILKFLGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRNIGPDTDIPAGDIGVGGREVGYMFGMYKKLAREHTGTLTGKGFEFGGSRLRPESTGFGAVY 213
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE2_PORG3 (NAD-specific glutamate dehydrogenase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 258 DDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 D G + +G+RVQ ++A GP KGGIR+HP V+ + L +K A+ +P GG KGG SPK S +E+ R + F ++ IG TDIPA D+G + + ++ Y K +TGK + GGS R +TG G VY Sbjct: 66 DQGKVQVNIGYRVQFNNAIGPYKGGIRFHPSVNLSILKFLGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRNIGPDTDIPAGDIGVGGREVGYMFGMYKKLAREHTGTLTGKGFEFGGSRLRPESTGFGAVY 213
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE2_BACFR (NAD-specific glutamate dehydrogenase OS=Bacteroides fragilis GN=gdhB PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 192 SKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 SK+ L+ P R T D G + + +G+RVQ ++A GP KGGIR+H V+ + L T+K A+ +P GG KGG SP+ S++E+ R + F ++ +G D+PA D+G + + ++ Y K TGK ++ GGSL R ATG G +Y Sbjct: 44 SKIIERLVEPDRIFTFRVTWVDDKGEVQTNLGYRVQFNNAIGPYKGGIRFHASVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFSPRGKSDAEIMRFCQAFMLELWRHLGPDMDVPAGDIGVGGREVGYMFGMYKKLTREFTGTFTGKGLEFGGSLIRPEATGFGGLY 213
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_PENCH (NADP-specific glutamate dehydrogenase OS=Penicillium chrysogenum GN=GDH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.882e-22 Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 216 IPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 +P R I+ D G + G+RVQ + A GP KGG+R+HP V+ + L +K A+ + GG KGG PK +++E+ R F ++ IG TD+PA D+G + + ++ +Y K V+TGK GGSL R ATG GVVY E Sbjct: 43 VPERVIQFRVVWEDDKGQVQINRGYRVQFNSALGPYKGGLRFHPTVNLSILKFLGFEQIFKNALTGLNMGGGKGGSDFDPKGKTDNEIRRFCVSFMTELCKHIGADTDVPAGDIGVTGREVGFMFGQYKKIRNQWEGVLTGKGGSWGGSLIRPEATGYGVVYYVE 207
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE2_CLOSY (NAD-specific glutamate dehydrogenase OS=Clostridium symbiosum GN=gdh PE=1 SV=4) HSP 1 Score: 103.219 bits (256), Expect = 1.533e-21 Identity = 63/172 (36.63%), Postives = 92/172 (53.49%), Query Frame = 3 Query: 198 LERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 LER ++IP R I+ D+G + G+RVQ + A GP KGG+R+ P V+ + L +K ++ +P GGAKGG P S+ E+ R + F +++ IG D+PA D+G A+ + ++ +Y K G V+TGK GGSL R ATG G VY E Sbjct: 49 LER-MVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVE 219
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_DEBOC (NADP-specific glutamate dehydrogenase OS=Debaryomyces occidentalis GN=GDHA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.826e-21 Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 3 Query: 216 IPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATG 686 IP R I+ D+G + GFRVQ + + GP KGG+R+HP V+ + L +K A+ + GG KGG +PK S+ E+ R F +++ IG TD+PA D+G + + ++ Y + + V+TGK + GGSL R ATG Sbjct: 44 IPERIIQFRVAWENDNGDVEVNNGFRVQFNSSLGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLSMGGGKGGCDFNPKGRSDGEIRRFCVAFMRQLARYIGADTDVPAGDIGVGGREIGYLFGAYKQMQNNWYGVLTGKGLTWGGSLIRPEATG 200
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_CHLSO (NADP-specific glutamate dehydrogenase (Fragment) OS=Chlorella sorokiniana PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.826e-21 Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 3 Query: 204 RSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 + ++ P R I + D G+L GFRVQ+ A GP KGG+R+HP V+ + LA +K ++ +P GG KGG PK S++E+ R + F ++ I D+PA D+G A+ + ++ +Y + + V+TGK + GGS R ATG G V E Sbjct: 126 KQIVEPERVITFRVSWLDDAGNLQVNRGFRVQYSSAIGPYKGGLRFHPSVNLSIMKFLAFEQIFKNSLTTLPMGGGKGGSDFDPKGKSDAEVMRFCQSFMTELQRHISYVQDVPAGDIGVGAREIGYLFGQYKRITKNYTGVLTGKGQEYGGSEIRPEATGYGAVLFVE 294
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_BOTFU (NADP-specific glutamate dehydrogenase OS=Botryotinia fuckeliana GN=gdhA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.441e-20 Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 216 IPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 IP R I+ D + G+RVQ + A GP KGG+R+HP V+ + L +K A+ + GG KGG PK S++E+ R F +++ IG TD+PA D+ + + ++ Y V+TGK GGSL R ATG G+VY Sbjct: 42 IPERVIQFRVVWEDDKNQVQVNRGYRVQFNSALGPYKGGLRFHPTVNLSVLKFLGFEQIFKNALTGLNIGGGKGGADFDPKGKSDNEIRRFCVSFMRELSKHIGADTDVPAGDINVGGREIGFLFGAYKAIQNKWEGVLTGKGGSWGGSLIRPEATGYGLVY 203 The following BLAST results are available for this feature:
BLAST of FC920529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920529 ID=FC920529; Name=FC920529; organism=Citrus clementina; type=EST; length=743bpback to top |