FC920541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2B_HUMAN (Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens GN=RRM2B PE=1 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.557e-87 Identity = 154/212 (72.64%), Postives = 177/212 (83.49%), Query Frame = 3 Query: 84 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYL 242
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2B_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus GN=Rrm2b PE=1 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.696e-87 Identity = 154/212 (72.64%), Postives = 176/212 (83.02%), Query Frame = 3 Query: 84 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 EEPLL + RF +FPIQYP IW MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYL 242
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_NEUCR (Ribonucleoside-diphosphate reductase small chain OS=Neurospora crassa GN=rnr-2 PE=3 SV=2) HSP 1 Score: 315.849 bits (808), Expect = 1.403e-85 Identity = 154/222 (69.37%), Postives = 179/222 (80.63%), Query Frame = 3 Query: 57 ALTKMPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 A T P EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DEK F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+ ++ LF+AI+T+PC+ KKA WAL WI D S TFA+RL+AFA VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L Sbjct: 67 APTLKPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHL 288
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_DROME (Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila melanogaster GN=RnrS PE=1 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.082e-85 Identity = 157/239 (65.69%), Postives = 184/239 (76.99%), Query Frame = 3 Query: 3 SSSTKEIEKNISLFSRISALTKMPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 SS+ I K+ + S PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L Sbjct: 48 SSTVNGIGKSANSLMEKSVTPFDPSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHL 284
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_LEIAM (Ribonucleoside-diphosphate reductase small subunit OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.715e-83 Identity = 142/209 (67.94%), Postives = 168/209 (80.38%), Query Frame = 3 Query: 84 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+ HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+EK RL HAI+T+PC+ KKA W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY+ Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYN 232
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_SWPVK (Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus (strain Kasza) GN=C14L PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 2.925e-83 Identity = 143/210 (68.10%), Postives = 174/210 (82.86%), Query Frame = 3 Query: 87 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 EP+L + RF +FPI+Y IW+MYK++ ASFWT EEVDLS+DL W+ LT DEK+F+ H+LAFFA+SDGIV ENLA RF +VQ +EAR FYGFQIA+ENIHSEMYSLL++TY++D+ EK LF+AIET+ CV KKA WA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRGLMPGLTFSNELISRDEGLHCDFACL++ L Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKHILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHL 211
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_YLDV (Ribonucleoside-diphosphate reductase small chain OS=Yaba-like disease virus GN=20L PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.235e-82 Identity = 145/211 (68.72%), Postives = 174/211 (82.46%), Query Frame = 3 Query: 87 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 EP+L P +++ +FPI Y IW+MYKKA ASFWT EEVDLS+D W L+ +EK+F+ H+LAFFAASDGIV ENLA RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI DS EKN LF+AIE + CV +KA WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKRGLMPGLTFSNELISRDEGLHCDFACIMFKHL 216
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_PLAF4 (Ribonucleoside-diphosphate reductase small chain OS=Plasmodium falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.738e-81 Identity = 140/210 (66.67%), Postives = 167/210 (79.52%), Query Frame = 3 Query: 87 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ HVLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLL 240
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_ENCCU (Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon cuniculi GN=ECU06_0730 PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.576e-81 Identity = 145/208 (69.71%), Postives = 171/208 (82.21%), Query Frame = 3 Query: 87 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 707 E LL P +RF + PI+Y IW+MYKKAE+SFWT EEV L +D+ W L A E+HF+++VLAFFAASDGIV NL RF TEV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+D+DEKN LF AI T+P V +KA WA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLHC+FACLL+ Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHCEFACLLH 215
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_CAEEL (Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis elegans GN=rnr-2 PE=1 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 9.739e-79 Identity = 143/212 (67.45%), Postives = 168/212 (79.25%), Query Frame = 3 Query: 84 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 +EP+L +RF +FP+++ IW YKKA ASFWT EEVDL +D+ WE + DE++F++ +LAFFAASDGIV ENL RF EVQV+EAR FYGFQIAIENIHSEMYS L+ETYI+D E+N LF+A++ + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS L Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKL 272 The following BLAST results are available for this feature:
BLAST of FC920541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920541 ID=FC920541; Name=FC920541; organism=Citrus clementina; type=EST; length=717bpback to top |