FC920541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR4_YEAST (Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces cerevisiae GN=RNR4 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.807e-48 Identity = 94/212 (44.34%), Postives = 142/212 (66.98%), Query Frame = 3 Query: 84 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 +E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++ ++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD + LF I +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL + +MPGL +N I RD G + DF+CLL++ L Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKD-PKNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHL 234
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_OSHV1 (Ribonucleoside-diphosphate reductase small chain OS=Ostreid herpesvirus 1 GN=ORF20 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 65/206 (31.55%), Postives = 96/206 (46.60%), Query Frame = 3 Query: 111 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI---ETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 D + P Y Q+ + K E+S W E+D D+ WE ++ +E+ V VLAFFA D +V + +A F E + E + F +Q E +H +Y+ L+ +KD L +A E P + KK W I +++ E ++ C E I F+ SF AI + M L NE I RDE LH F L L+ Sbjct: 70 DHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIA-IFADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAP-IKKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRALVLGNEFIRRDETLHFRFYAELLRLM 272
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_EBVG (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain GD1) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 56/177 (31.64%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 183 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK-DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 W A + L++D + L + F + F A ++ +V N+ +T + + +Y Q A+EN+H E Y+ +L D N AI + K +W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYN 200
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_EBVB9 (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain B95-8) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 56/177 (31.64%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 183 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK-DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 W A + L++D + L + F + F A ++ +V N+ +T + + +Y Q A+EN+H E Y+ +L D N AI + K +W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYN 200
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_EBVA8 (Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr virus (strain AG876) GN=BaRF1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 56/177 (31.64%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 183 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK-DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 W A + L++D + L + F + F A ++ +V N+ +T + + +Y Q A+EN+H E Y+ +L D N AI + K +W + + + T E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYN 200
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_HHV2H (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 2 (strain HG52) GN=UL40 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 58/207 (28.02%), Postives = 100/207 (48.31%), Query Frame = 3 Query: 96 LAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 + P P+R+ + Q P I + + + W E+ D L+ E F + AF +A+D +V ENL G + + +Y Q IE +HS +Y+++ ++D+ R + A T+ P + K W + ++ E+ I +EG+FF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ Sbjct: 27 VCPTPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA-RTINHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYN 230
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_HHV23 (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 2 (strain 333) PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 58/207 (28.02%), Postives = 100/207 (48.31%), Query Frame = 3 Query: 96 LAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 + P P+R+ + Q P I + + + W E+ D L+ E F + AF +A+D +V ENL G + + +Y Q IE +HS +Y+++ ++D+ R + A T+ P + K W + ++ E+ I +EG+FF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ Sbjct: 27 VCPTPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA-RTINHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYN 230
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_HHV11 (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 1 (strain 17) GN=UL40 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 59/205 (28.78%), Postives = 99/205 (48.29%), Query Frame = 3 Query: 102 PNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P+P+R+ + Q P I + + + W E+ D L+ E F + AF +A+D +V ENL G + + +Y Q IE +HS +Y+++ ++D+ R + A T+ P + K W + + E+ I +EGIFF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ Sbjct: 32 PDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA-GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYN 233
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_VZVO (Ribonucleoside-diphosphate reductase small chain OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF18 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 3 Query: 141 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P I + + ++ W + + D ++ + LT DE F + F +A+D +V NL G + +Y Q IE +H+ +YS + + + DE R+ + T+ P + +K W + + + AE+ I +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y+ Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNL-GSLTQLFSQKDIHHYYIEQECIEVVHARVYSQI-QLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYN 205
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_VZVD (Ribonucleoside-diphosphate reductase small chain OS=Varicella-zoster virus (strain Dumas) GN=ORF18 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 3 Query: 141 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P I + + ++ W + + D ++ + LT DE F + F +A+D +V NL G + +Y Q IE +H+ +YS + + + DE R+ + T+ P + +K W + + + AE+ I +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y+ Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNL-GSLTQLFSQKDIHHYYIEQECIEVVHARVYSQI-QLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYN 205 The following BLAST results are available for this feature:
BLAST of FC920541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920541 ID=FC920541; Name=FC920541; organism=Citrus clementina; type=EST; length=717bpback to top |