FC920544

Overview
NameFC920544
Unique NameFC920544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 2
Query:  215 GEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSS-ISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNKY 643
            GE P  +S+   L +L+L GNK +G+IP +IG +  L  L + +N  S  IP ++ NL++L+ LDL  N+  G I    G            N   G I SS I  +  L+ LDL  N  SG +P  + ++  L  L L +N +
Sbjct:  266 GEFPGQVSNCQNLNVLNLWGNKFTGNIPAEIGSISSLKGLYLGNNTFSRDIPETLLNLTNLVFLDLSRNKFGGDIQEIFGRFTQVKYLVLHANSYVGGINSSNILKLPNLSRLDLGYNNFSGQLPTEISQIQSLKFLILAYNNF 409          

HSP 2 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 51/167 (30.54%), Postives = 74/167 (44.31%), Query Frame = 2
Query:  140 GYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNK 640
            G I     + T++  L L     + G     I  +P L  LDL  N  SG +P +I ++  L  L +A NN SG IP    N+  L  LDL  N+++G IP S G            N +SG IP  I     L   +++ NQ+SG     L +M    +   + N+
Sbjct:  338 GDIQEIFGRFTQVKYLVLHANSYVGGINSSNILKLPNLSRLDLGYNNFSGQLPTEISQIQSLKFLILAYNNFSGDIPQEYGNMPGLQALDLSFNKLTGSIPASFGKLTSLLWLMLANNSLSGEIPREIGNCTSLLWFNVANNQLSGRFHPELTRMGSNPSPTFEVNR 504          

HSP 3 Score: 72.4034 bits (176), Expect = 2.582e-12
Identity = 54/150 (36.00%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  167 LTRLSSLTLADW--KGITGEIPRCI--SSIPFLRI---LDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQ-ISGMIPAS 592
            LT+ S  +L D   KG  G  P C   S++  L+I   L L GNK SG+IP  I ++ RL+ L++  N   G +PP I  L  L  L+L  N  SG IP  +G            N  SG  P+S++ +  L+  ++S N  ISG IP +
Sbjct:  538 LTKKSCRSLWDHVLKGY-GLFPVCSAGSTVRTLKISAYLQLSGNKFSGEIPASISQMDRLSTLHLGFNEFEGKLPPEIGQL-PLAFLNLTRNNFSGEIPQEIGNLKCLQNLDLSFNNFSGNFPTSLNDLNELSKFNISYNPFISGAIPTT 685          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  260 LDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIP 586
            +DL    LSG +   +G+L  L  L +  NNI+G +P  + NL++L+ LDL  N  +GPIP S+G            N ++G IP S++ I  L  LDLS N++SG +P
Sbjct:   77 VDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVP 185          

HSP 2 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 2
Query:   11 NDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIP 442
            N C   W+ V+C+ E + V  ++L G ++            ++G + P + +L  L  L L     ITG +P  + ++  L  LDL  N  +G IP  +G+L +L  L + +N+++G IP S+ N+ +L  LDL NNR+SG +P
Sbjct:   59 NPC--TWFHVTCNNE-NSVIRVDL-GNAD------------LSGQLVPQLGQLKNLQYLELYS-NNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVP 185          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 49/156 (31.41%), Postives = 72/156 (46.15%), Query Frame = 2
Query:  170 TRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFN 637
            + L SL      G+ GE+P  I ++  L+ L ++ N  SG++P  I  L RL  L  A N+ +G IP     L  L+ LDL  N  SG +P S G            N + G +P  +  +  L  LDL  N+ SG +  ++  +  L  L L  N
Sbjct:  142 SNLESLEFRSNPGLIGELPETIGNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNN 297          

HSP 2 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 42/121 (34.71%), Postives = 58/121 (47.93%), Query Frame = 2
Query:  281 LSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNKY 643
            L G++P  IG L +L  L + +N  SG +P SI NL  L  L    N  +G IP                N  SGT+P+S   +  L  LDLS N + G +P  LG +  L  L+L  N++
Sbjct:  155 LIGELPETIGNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRF 275          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 58/206 (28.16%), Postives = 90/206 (43.69%), Query Frame = 2
Query:   20 CHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIP-RCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMN-QISGMIPASLGKMAVLATLNLD 631
            C+ W GV+C+Q+  R+  + L G                                       G+ G+IP   IS +  LR+L L  N +SG+ P+D   L  LA L + DNN+SG +P   +   +L  ++L NN  +G IP S+             N +SG IP  +S++  L  +DLS N  ++G IP  L +    +   +D
Sbjct:   55 CNIWTGVTCNQDGSRIIAVRLPGV--------------------------------------GLNGQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSGDIP-DLSVLSSLQHIDLSNNYDLAGPIPDWLRRFPFSSYTGID 221          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 2
Query:  260 LDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNKYR 646
            LDL    LSG++   + +L  L  L + +NNI+G IP  + +L  L+ LDL  N ISGPIP S+G            N +SG IP S++ +  L  LD+S N++SG IP + G  +   +++   NK R
Sbjct:   75 LDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVN-GSFSQFTSMSFANNKLR 201          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 2
Query:  260 LDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPAS 592
            +DL   KLSG +  ++G+L  L  L +  NNI+G IP  + +L  L+ LDL  N ISGPIP S+G            N +SG IP +++ + +L  LD+S N++SG IP +
Sbjct:   80 VDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVN 189          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  248 FLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASL 595
            F+  L L     SG +   +G L  L  L +  N I+G IP    NL+SL  LDL +N+++G IP ++G            N+++GTIP S++ +  L +L L  N +SG IP SL
Sbjct:   71 FVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQSL 186          

HSP 2 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  176 LSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSI 523
            ++SLTL+D    +G +   +  +  L+ L L GN ++G+IP D G L  L  L++ DN ++G IP +I NL  L  L L  N+++G IP S+             N +SG IP S+
Sbjct:   72 VTSLTLSDMN-FSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQSL 186          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 56/173 (32.37%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   26 NWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLA 544
            NW+GV CD    RV  + L G            +G         +  LT+L +L+L  +  ++G IP   S++  LR L L GN  SG+IP  +  L  +  +N+ +N  SG IP ++ + + L+ L L  N++SGPIP                NQ++G+IPSS+S   R A
Sbjct:   56 NWHGVHCD--AGRVTALRLPG------------SGLFGSLPIGGIGNLTQLKTLSLR-FNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIP---EITLPLQQFNVSSNQLNGSIPSSLSSWPRTA 210          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 52/167 (31.14%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  149 SPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLD-FNKYR 646
            S  V  L R       +WKG+T     C +    +  L L  +KL G +P ++G+L +L +L + +N +  +IP S+ N ++L  + L+NN I+G IP  +G            N ++G IP+S+  + RL   ++S N + G IP+      +LA L+ D FN  R
Sbjct:   46 SDGVIGLWRPEDPDPCNWKGVT-----CDAKTKRVIALSLTYHKLRGPLPPELGKLDQLRLLMLHNNALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRLTKFNVSNNFLVGKIPSD----GLLARLSRDSFNGNR 203          

HSP 2 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 2
Query:   26 NWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIP 442
            NW GV+CD +T RV  ++L                 + G + P + KL +L  L L +   +   IP  + +   L  + L  N ++G IP +IG L  L  L++++NN++GAIP S+  L  L   ++ NN + G IP
Sbjct:   62 NWKGVTCDAKTKRVIALSLTYHK-------------LRGPLPPELGKLDQLRLLMLHN-NALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRLTKFNVSNNFLVGKIP 186          
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 47/162 (29.01%), Postives = 83/162 (51.23%), Query Frame = 2
Query:  209 ITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNKYRVPYRRVYELWDQQFNL 694
            + G +P+ +  +P+LR +DL  N ++G +PR+    + L  +++  N +SG IP    N SSL +LDL +N  SG IP  +G            N+++GT+P+S++ +  + D  ++  Q+SG IP+ +     L  L +  +    P   V  +     NL
Sbjct:  112 LPGTLPQIVK-LPYLREIDLAYNYINGTLPREWASSN-LTFISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNL 270          

HSP 2 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 2
Query:  209 ITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLS------------------------MNQISGMIPASLGKMAVLATLNLDFNK 640
            ++GEIP+   +   L  LDL  N  SG IP+++G L  L  L ++ N ++G +P S+A L ++    + + ++SG IP  +             + ++G IPS IS++  L +L +S                           ISG IP  L  +  L TL+L FNK
Sbjct:  158 LSGEIPKEFGNSS-LTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNLRISDIRGPVQPFPSLKNVTGLTKIILKNCNISGQIPTYLSHLKELETLDLSFNK 324          
The following BLAST results are available for this feature:
BLAST of FC920544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
Y1743_ARATH1.617e-1434.03Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH1.617e-1438.53Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
PII2_ARATH2.112e-1431.41Piriformospora indica-insensitive protein 2 OS=Ara... [more]
Y4374_ARATH2.758e-1428.16Probable inactive receptor kinase At4g23740 OS=Ara... [more]
SERK5_ARATH4.705e-1437.21Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH6.145e-1439.64Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5129_ARATH8.026e-1436.21Probable LRR receptor-like serine/threonine-protei... [more]
Y3288_ARATH8.026e-1432.37Probable inactive receptor kinase At3g02880 OS=Ara... [more]
FEI2_ARATH8.026e-1431.14LRR receptor-like serine/threonine-protein kinase ... [more]
RKF1_ARATH1.788e-1329.01Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC32009G06EF RVDevelop1 Citrus clementina cDNA clone C32009G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920544 ID=FC920544; Name=FC920544; organism=Citrus clementina; type=EST; length=696bp
CTGGACGGGCAACGACTGTTGCCACAACTGGTACGGTGTTAGCTGTGACC
AGGAAACTCACCGGGTCGCTGACATTAACCTACGTGGCGAGTCTGAGGAC
CCGATATTCCAGCGGGCCCACCGAACCGGGTACATGACCGGGTATATCTC
ACCCGCTGTGTGTAAACTCACGCGTCTCTCCAGTTTAACGCTCGCCGACT
GGAAAGGCATCACCGGGGAAATCCCACGTTGCATTTCTTCAATTCCTTTT
CTCCGCATTCTTGATTTAATCGGAAATAAGTTATCGGGCGACATTCCCCG
AGATATTGGCCGGCTTCACAGACTCGCTGTCTTAAATATCGCCGATAACA
ACATATCGGGTGCGATTCCCCCTTCCATTGCTAATCTTTCCAGCTTGATG
CATCTTGACTTGCGTAACAACAGAATTTCGGGCCCGATTCCGGGAAGTGT
CGGGCGACTCCGAATGATGAGCCGGGCTTTGCTGTCTCGGAATCAGATTT
CGGGAACAATCCCAAGTTCCATTTCGATGATTTATCGTCTTGCCGATTTG
GACTTGTCGATGAACCAAATATCGGGTATGATACCGGCTTCGCTGGGGAA
AATGGCGGTATTGGCAACTCTTAATCTTGATTTTAACAAGTATCGGGTCC
CATACCGGCGAGTTTATGAACTCTGGGATCAGCAATTTAATCTCAG
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