FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33 Identity = 76/175 (43.43%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 621 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 76/175 (43.43%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 621 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + + D Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 75/182 (41.21%), Postives = 114/182 (62.64%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAF 642 GYDR IT+FSP+GRLFQVEYA +AVK G T+IG++ K+ V ++ K+V KLL+ ++ ++ I +++ +G+ ADAR L+ +AR EA R Y + V LAK I D Q YTQ+ +RP GV ++ +DE P+L++ DP+G +KAT+ G+ F EK+ ++D +F Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKR-GATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSF 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 621 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YT H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE+K Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPVAMEILEEK 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33 Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I +++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED 182
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 72/179 (40.22%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D++ PRLF+ DP+G +KAT+ G + E K D Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDK-RPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED 182
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33 Identity = 75/176 (42.61%), Postives = 113/176 (64.20%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KK+ KL++ S+ + I Y+ + +G+ ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLEK+ K Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYK 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33 Identity = 75/175 (42.86%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 621 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ D V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 73/179 (40.78%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |