FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 67/184 (36.41%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD------KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR + FSPEGRLFQVEYA +A+K G T+IGV+ KD+V + +K++ L++ SV LF I ++G +G+TADART+++ AR + RF Y ++ + I D + + + RP GV ++ IDE GP+L+ +P+G +F ++A + G + A + L K+ D Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKL-GSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEH-GPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKD 189
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 65/178 (36.52%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 Y +T FSP G+L Q+E+A AV +G TS+G++ + V + T+KK+P L+D TSV + +T +G++ +GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FLEK+ D Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 65/178 (36.52%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 Y +T FSP G+L Q+E+A AV +G TS+G++ + V + T+KK+P L+D TSV + +T +G++ +GM D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FLEK+ D Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 68/173 (39.31%), Postives = 99/173 (57.23%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 YDR ITIFSP+GRL+QVEYA +AVK G S+G+R D + + K+ L++ TSV + ++G+ + G ADAR L+ AR +A R +YG + ++ L K + D Q YTQ RP GV ++ I E+ PRL++ DP+G + KA S G + LE+ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKR-GTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGI-EDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEE 180
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAG 582 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIG 162
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 69/181 (38.12%), Postives = 105/181 (58.01%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVY---TQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR + FSPEGRLFQVEYA +A+K G T+IG++ KD V + +K+V LL+ +SV + I +++G +G+ ADARTLV+ AR E RF YG M V+ + I D + + + + RP GV ++ DE GP L+ DP+G F+ A + G + A + L+++ + Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKL-GSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKE 186
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GY +T FSP G+L Q+EYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++ +E P LF+ DP+G +F KAT+ G FLEK+ D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GY +T FSP G+L Q+EYA AV A G S+G++ + V + T+KK L D SV + PITK++GL+ +GM D R LV +AR A ++ Y +P L + +A Q YTQ +RP GV ++ +E P LF+ DP+G +F KAT+ G FLEK+ D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED 181 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |