FC920570

Overview
NameFC920570
Unique NameFC920570
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.035e-15
Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 619
            L+ L +   F      + +   K   P P    P+IG+L  L G  P  + L  L+ KYGP+  L LG  P+++ S  E V+D   TND + + R K      + Y +   + +P+G+YWR IR I    LLS+ R++  +  R  E    I+ L  + + ++   +   +  L   L +NI  ++  GK+++
Sbjct:    1 LVPLFVFILFLHKCFFTTSNNNKKLPPSPRKL-PIIGNLHQL-GLHPH-RSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSS---SATDLRDLFCWLAYNIINRVALGKKYN 187          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.351e-15
Identity = 55/184 (29.89%), Postives = 99/184 (53.80%), Query Frame = 2
Query:   56 IVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK-DLYSLCSENAFNPAKVVI---SKLIEQLTFNISLK 595
            +V F   +IAKS  K +KN  P P    P+IG+L  L G++P  + +  L+  YGP+ SL+LG    ++ +  E V+D   T D    +R  +     + Y+      +PY +YWR +RK+   EL ++ R++  +H+R  EV +F++ +  +  SE   N ++ ++     +I ++ F I+L+
Sbjct:   10 LVIFASLLIAKSKRKPKKNLPPGPPRL-PIIGNLHQL-GEKPH-RAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLE 190          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.351e-15
Identity = 59/199 (29.65%), Postives = 100/199 (50.25%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREK-NTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            L++L +      ++ KSI KR   N    P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVS  ++  D   T D I A R K      +       A APYG+YW+ ++ I    LLS+  +   K +R  E+   I+ + +  + +   P+ V +S+L   LT +I  +   G+++S+K+
Sbjct:    5 LVTLCLTTLLALLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVEN--ASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKE 199          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  140 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR-AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            P++G+   L+G      IL  LA KYGP+  L++G+   ++ S  +I ++ F T+D + A R + + + K + YD +   ++PYG YWR +RKI+  ELLS   ++  + +R  EV  FIK + S          ++ +SK I  L + I+ +   G++
Sbjct:   34 PILGNAHQLSGGHTH-HILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSK------EGTRINLSKEISLLIYGITTRAAFGEK 185          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            I+ K +   +    P P G  P+IG+L  L   + + K    ++ +YGP+  LRLG  P+++VS  E  ++   T+D    TR K  A     Y+      AP+G  WR++RKI T EL S  +L+  +++R  E +  +K +     E     + V + K++   T +I  +L  G+ F   D+
Sbjct:   16 ILFKKLLPSKGKLPPGPIGL-PIIGNLHQLG--KLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDET--QNSSVDLRKVLFSFTASIICRLAFGQNFHQCDF 195          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKI-VAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 625
            LL+LL+     R   K+ N         P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVS  ++  D   T+D + A R K  V  K +     + A APYG+YWR ++ I    LL++  +   + +R  E+   I+ L  + CS    +P+ V +S+++  LT +I  ++  G+++S K
Sbjct:   13 LLALLLKSILKRTATKNFNL--------PPSPWRLPVIGNLHQLSLHTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDV-AFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSS---SPSPVNLSQILMTLTNDIICRVALGRKYSGK 197          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 60/204 (29.41%), Postives = 98/204 (48.04%), Query Frame = 2
Query:   32 IFELLSLLIVYFFWRIIAKSINKRE--KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            I   + +L+  F   ++ K   K E  +N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:    5 ISSAIIILVATFVASLLIKQWRKSESRQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 60/204 (29.41%), Postives = 98/204 (48.04%), Query Frame = 2
Query:   32 IFELLSLLIVYFFWRIIAKSINKRE--KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            I   + +L+  F   ++ K   K E  +N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:    5 ISSAIIILVATFVASLLIKQWRKSESQQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 55/200 (27.50%), Postives = 105/200 (52.50%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS-AKDYEE 637
            +L ++ + FF +   K++NK     +P      PLIG+L  L+ Q P  + L  L+ +YGP+  L  G  P+++ S  E  +D   T+DR+ A+R +    + + Y +   A APYG+YWR ++ ++   LLS+  +   + VR  E+   ++ +    S+       V +SK++  LT ++  ++  G+++    D++E
Sbjct:    9 ILFIITILFFKK--HKTVNKIINFPSPP---RLPLIGNLHQLS-QHPH-RSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSK------PVNLSKILSSLTNDVICRVALGRKYGVGTDFKE 195          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKR--EKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            ++ L++ Y    +I K   K   ++N  P P    PLIGHL LL G+ P    L ++A +YGP+  ++LG+   +++S  E  K+     D   A R + +  K M YDN     +PY  +WR +RKI  +ELLS+  +     +R  EV   +  L S    +A     V +++ I  LT +I  +   G     +D+EE
Sbjct:    9 IIILVVTYTISLLIIKQWRKPKPQENLPPGPPKL-PLIGHLHLLWGKLPQ-HALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRS----SAAAGEAVDLTERIATLTCSIICRAAFGS--VIRDHEE 201          
The following BLAST results are available for this feature:
BLAST of FC920570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71A3_SOLME1.035e-1528.50Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71B1_THLAR1.351e-1529.89Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71AJ_ARATH1.351e-1529.65Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO2.305e-1531.45Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BZ_ARATH2.305e-1529.19Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH3.010e-1530.15Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP3.931e-1529.41Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR3.931e-1529.41Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71AN_ARATH3.931e-1527.50Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI6.706e-1530.85Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionC32010B02EF RVDevelop1 Citrus clementina cDNA clone C32010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920570 ID=FC920570; Name=FC920570; organism=Citrus clementina; type=EST; length=669bp
GACCATGGATTCTACTTCTTTCTCCCCAGCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAAACAGGCAGCGAGG
CTTGGCGTATNCATAGAGC
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