FC920591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.302e-54 Identity = 100/198 (50.51%), Postives = 138/198 (69.70%), Query Frame = 2 Query: 110 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG GE +I RS Sbjct: 261 LNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRS 456
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.416e-53 Identity = 98/198 (49.49%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 110 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG GE + RS Sbjct: 256 LNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTSRS 451
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 3.155e-53 Identity = 98/198 (49.49%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 110 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG GE + RS Sbjct: 259 LNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTARS 454
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.155e-53 Identity = 99/198 (50.00%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 110 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 +N+VVIGHVD+GKST GHL+Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFET T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ + F+P SG GE +I RS Sbjct: 263 LNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRS 458
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.155e-53 Identity = 104/205 (50.73%), Postives = 136/205 (66.34%), Query Frame = 2 Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 M KEK HIN+ IGHVD GKST G L+Y+ G I + +IE+ KEA E K +F++AWV+D+L+ ERERG+TID+A KF+T KYY T++D PGHRDFIKNMITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS LK VGY + IPF+P+S + G+ + ++S Sbjct: 1 MAKEKEHINVAFIGHVDHGKSTLIGRLLYETGEIPEHIIEKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRV--NYDQKEYEAAKEAVSKLLKMVGYKVDEIPFIPVSAYYGDNVAKKS 196
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.120e-53 Identity = 102/202 (50.50%), Postives = 139/202 (68.81%), Query Frame = 2 Query: 98 EKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 +K H+N+ VIGHVD GKST G L+++ G + +IE+++ EA E K SF +AWV+D L+ ERERG+TIDI+ +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA KYS+ RY+E+ KEVS L VG+ + +PF+P S FEG+ + + S Sbjct: 3 DKPHMNLAVIGHVDHGKSTFVGRLMFETGAVPAHLIEKYKAEAKEKGKESFAFAWVMDTLKEERERGVTIDISHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLSRTLGINQLIVAINKMDAA--KYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSS 195
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53 Identity = 100/198 (50.51%), Postives = 136/198 (68.69%), Query Frame = 2 Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEG 682 M +K H+N+ VIGH+D GKSTT G ++++ G + +IE + KEA K +F++AWV+D L+ ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S +K VGY PE F+PIS +G Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTTVGRMMFETGAVPAHIIEAYRKEAESKGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQG 189
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53 Identity = 95/205 (46.34%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 98 EKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERSTTL 712 +K H+N+ +IGHVD GKST TG L+ + G +D++ E EA ++ K FKYAW++D+L+ ERERG+TI+ FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ +PF+P+S G+ + +S+ + Sbjct: 13 KKPHLNLAIIGHVDHGKSTLTGRLLLETGYVDEKAFAELEAEAKKLGKEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNM 215
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.199e-52 Identity = 99/198 (50.00%), Postives = 136/198 (68.69%), Query Frame = 2 Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEG 682 M K HIN+ VIGH+D GKST G L+++ G + +IE+++KEA K +F++AWV+D L+ ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ +EVS L+ +G+ P+ IPF+P S F+G Sbjct: 1 MAATKPHINLAVIGHIDHGKSTLVGRLLFETGAVPAHIIEQYKKEAESKGKGTFEFAWVMDSLKEERERGITIDIAHRRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAI--NYDQKRYNEVKEEVSKILRMIGFKPDQIPFIPTSAFKG 189
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52 Identity = 108/205 (52.68%), Postives = 142/205 (69.27%), Query Frame = 2 Query: 89 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEGEYMIERS 703 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+D+L+ ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY P +PIS +EGE ++++S Sbjct: 1 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEVKAQVEKLLKMLGYKD--FPVIPISAWEGENVVKKS 192 The following BLAST results are available for this feature:
BLAST of FC920591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920591 ID=FC920591; Name=FC920591; organism=Citrus clementina; type=EST; length=717bpback to top |