FC920591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 72/204 (35.29%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPE*IPFVPISG---FEGE 685 + K H+NI IGHVD GK+T T + L +K AE+ YA + D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D +EI++ E+ L + + IP V +SG EGE Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVDD-------EEIIELVELEIRELLSSYDFPGDDIPVVQVSGLKAIEGE 182
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 62/190 (32.63%), Postives = 97/190 (51.05%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFV 661 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + + IP + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 62/190 (32.63%), Postives = 97/190 (51.05%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFV 661 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + + IP + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_PEDPA (Elongation factor Tu OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 556 + K H+NI IGHVD GK+T T I K + E+ +A++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKASD-------YADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIVVFLNKTD 139
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 556 + K H+N+ IGHVD GK+T T + + L V +++ +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITFCLAKAGGAVPTAYDQ---------------IDKAPEERERGITIATAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVD 139
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 64/196 (32.65%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISGFEG 682 + K H+NI IGHVD GK+T T + K AE + F+ +D ERERGITI + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + IP + S +G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKG 178
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_EXIS2 (Elongation factor Tu OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 89 MGKEKV-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 556 MGKEK H+N+ IGHVD GK+T T + L + +F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NK+D Sbjct: 1 MGKEKFDRSKPHVNVGTIGHVDHGKTTLTAAISAVLAKSQGKAATKFDQ---------------IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLSRQVGVPFIVVFMNKVD 139
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_BOVIN (Elongation factor Tu, mitochondrial OS=Bos taurus GN=TUFM PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 71/215 (33.02%), Postives = 104/215 (48.37%), Query Frame = 2 Query: 20 QSLSIACG*GFSRALSVLSKYFIMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPE*IPFV 661 Q+L + C R L+V +K + ++K H+N+ IGHVD GK+T T + K AE FK +D ER RGITI+ A ++ T + D PGH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY E P + Sbjct: 34 QALPVLC-----RGLAVEAKKTYV-RDKPHVNVGTIGHVDHGKTTLTAAIT---------------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPII 216
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_BORT9 (Elongation factor Tu OS=Borrelia turicatae (strain 91E135) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 2 Query: 86 IMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 619 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D AVL++ + +G + QT+EH LLA +G+ ++I NK+D P+ + E+++ V Y Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETAGMHYAHVDCPGHADYIKNMITGAAQMDAAVLLVAADSGA-------EPQTKEHLLLAQRMGINKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC920591 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 70/200 (35.00%), Postives = 99/200 (49.50%), Query Frame = 2 Query: 95 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLEAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPE*IPFVPISG---FEGE 685 + K H+NI IGHVD GK+T T + L +K AE+ YA + D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + IP V +SG EGE Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVVQVSGLKAIEGE 182 The following BLAST results are available for this feature:
BLAST of FC920591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920591 ID=FC920591; Name=FC920591; organism=Citrus clementina; type=EST; length=717bpback to top |