FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.357e-64 Identity = 119/211 (56.40%), Postives = 156/211 (73.93%), Query Frame = 1 Query: 100 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEED-----GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D ++ +++ ++ ++LLDNEIR+ + ELQR + E + LPYLV N+VE+++MN ++ E G N++LD+ GK V+KTS+RQT+FLP+VGLVDPDKLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI+ELVEAIVLPM ++F+ +G+R PKG L+YGPPGTGKT Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKT 229
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.656e-63 Identity = 120/205 (58.54%), Postives = 152/205 (74.15%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D++ MTAD++ R ++LL+NE +VL+ E +LE+DS LP+LV N+VEI++M + E + KCVV+K STRQTIFL G+VD DKL+PGDLVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQELVEA+VLPMTHKERF+ +G++PPKGVL+YGPPGTGKT Sbjct: 24 DEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQPS------------KCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKT 216
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.688e-63 Identity = 117/206 (56.80%), Postives = 154/206 (74.76%), Query Frame = 1 Query: 100 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 + ++ + D++ +RLL+N+I+V+K E QR E + LPYLVGN+VEIL+M P++ ++ AN + ++ R GK V+KTSTRQTIFLP++GLV+P++L PGDL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM ++F+KLGV+PPKG L++GPPGTGKT Sbjct: 28 EQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKT 233
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.011e-36 Identity = 81/192 (42.19%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 148 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV--DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 R+L++E R+L+ + ++ + LPYLVGN+VE+L+ E G V+ STR + +LP+ GL+ +L+PGDLV ++KD+ ++ + LP +YD +V M + D KP E Y DIGGLE+QI+EL EAIVL +TH ERF+KL ++PPKGVL+YGPPGTGKT Sbjct: 26 RMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNKQLPYLVGNVVEVLD-------EHSG--------------VVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.796e-32 Identity = 81/214 (37.85%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 82 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXL--PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ NL++D L +++ +R+ + E R+LK EL++ LE ++ P +VG +V D +RK VV+K+ST + + V V+PD L PG V +N+ + ++D LP D R KAMEVDE+P Y DIGGLEKQ+QE+ E + LP+ H E F+K+G+ PPKG+LLYGPPGTGKT Sbjct: 30 DNSNLKNDLLK----EELQEKARIAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVV------------------DKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.324e-28 Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 157 DNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D EIR+LK++++ E S PY+ ++E+++ N VV+K+ST + + V VD LKPG +V +N I+D LP YD VKAMEV+E+P + D+GGLE+QI+E+ EA+VLP+ + F++LG+ PPKGVLL+GPPGTGKT Sbjct: 22 DVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNR---------------------VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKT 187
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28 Identity = 75/193 (38.86%), Postives = 103/193 (53.37%), Query Frame = 1 Query: 139 RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 R + L+ E+ + ++E EL P +VG + EIL+ DG V++K+ST V VD ++L+PG V +N+ S ++D LPSE DSRV AMEVDE P Y+DIGGL++QI+E+ E + P+ E F+K+GV PPKGVLLYGPPGTGKT Sbjct: 56 RRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILD---------DGR------------VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKT 227
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 379 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQH 741 VV+++S + V V+P LK G +N+ S I++ LPS YDS+V ME+ + PTE Y DIGGLEKQI E+ EA+ LPMT + F+K+G+ PPKGVLLYGPPGTGKT V H Sbjct: 89 VVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAH 209
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 379 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V++++S + L+DPD LKPG +N+ S I+D LP+ YD+++ ME+ E P E Y +IGGLE QI+E+ EA+ LP+T + F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 89 VIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKT 201
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 74/213 (34.74%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 91 NLEDDQLSSMTADDIV----RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++E+ + DD V R R L+ ++R L+ + +R EL P GN++E+L D +R +++ + + ++ DKLKPG V +++ + I++ LPSE D V EV E+P YNDIGGLEKQ+QEL EAI LP+ H E F+++G+ PPKGVLLYGPPG GKT Sbjct: 2 SIENTDVHPEGYDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQP-------PAFAGNVIEVL-----------------DDER----AIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKT 186 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |