FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 487 YLILDTLPSEYDSRV---KAMEVDEKPTED---------YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 + ++ TLPS+ + +E+ E+P + Y DIGGL +Q+ ++ E I LP+ H E F++LG+ PPKGV+LYGPPGTGKT Sbjct: 150 FKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKT 238
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 505 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 L E S +K +V P Y DIGGL+++++++ E I LPM H E F+KLG+ PPKGVLL GPPGTGKT Sbjct: 160 LKEEPVSEIKETKV---PDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKT 227 HSP 2 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 550 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 E P + DIGGLE+ QEL EA+ P+ KE F+K+GVRPPKGVLL+GPPGTGKT Sbjct: 445 EVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKT 500
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 448 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ GDL G+ + +++T P+EY E+ DE+ +D Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 255 HSP 2 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 544 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V E P +NDIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKT Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 528
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 568 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 Y DIGGLE +IQ + E + LPM H + FQKLG+ PP+GVLL+GPPGTGKT Sbjct: 188 YEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKT 237
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 364 RKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 RKG +++ R F V + PG+ V D+ + + P + + + EV Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT Sbjct: 152 RKGDLFLVRGGMRSVEFKVV-------ETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVG------YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256 HSP 2 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 544 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKT Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 448 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ GDL G+ + +++T P+EY E+ DE+ ++ Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 255 HSP 2 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 544 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKT Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 528
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 448 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ GDL G+ + +++T P+EY E+ DE+ ++ Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT Sbjct: 151 VRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256 HSP 2 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 544 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKT Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 460 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHNKC 750 D +GV +++ L S ++ + V E P + DIGGLE+ +EL+E++ P+ H E+FQK G+ P +GVL YGPPGTGKT L N+C Sbjct: 468 DSLGVTMENFRY--ALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKT-MLAKAVANEC 561 HSP 2 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 26/50 (52.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 568 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+G+L+YGPPGTGKT Sbjct: 228 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKT 277
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 469 GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G+ + +++T P EY E+ DE+ ++ Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT Sbjct: 162 GMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12 Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 448 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ GD+ G+ + +++T PS Y +K + +E E Y+DIGG+ KQ+ ++ E + LP+ H F+ +GV+PP+G+LLYGPPGTGKT Sbjct: 146 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |