FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 493 ILDTLPSEYDSRVKA--MEVDEKPTED---------YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 +++T PS Y + +E+ E+P ++ + DIG LE+ Q++ E + PM H E FQ+LG+ PPKG+LLYGPPGTGKT Sbjct: 175 VVNTQPSNYVYVTGSTNIEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKT 260 HSP 2 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 496 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 L+ L S S ++ + V E P ++NDIGGL+ Q+L EA+ P+ E F K GV PPKG+LL+GPPGTGKT Sbjct: 463 LNALKSIQPSLLREVYV-EVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKT 535
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 499 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 DT+ +K E +E + Y+D+GG+ KQ+ ++ E + LP+ H + F+ +G++PP+G+LL+GPPGTGKT Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKT 258
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 364 RKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 RKG V++ RQ F V ++P + V +D+ + + P + M Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+GVL+YGPPGTGKT Sbjct: 157 RKGDHFVVRGGMRQVEFKVV-------DVEPEEYAVVAQDTIIHWEGEPINREDEENNMN-----EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKT 262
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 568 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+L+YGPPGTGKT Sbjct: 200 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 249
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 568 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 Y+D+GG Q+ ++ E + LP+ H + + K+GV+PPKG+LLYGPPGTGKT Sbjct: 207 YDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKT 256 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |